C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000086017 NXF1 (2 of 4) 7955 + 14:8897699-8935452 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000129030 NXF1 (2 of 4)-201 8897699-8935452 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSDART00000129030
Transcript ID Brain Kidney
ENSDART00000129030 0.027±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YD CIL_0000YD_0001 CGP 14:8897699-9013043

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006406 IEA mRNA export from nucleus
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126952 NXF5 nuclear RNA export factor 5 protein_coding Homo_sapiens
ENSG00000147206 NXF3 nuclear RNA export factor 3 protein_coding Homo_sapiens
ENSG00000162231 NXF1 nuclear RNA export factor 1 protein_coding Homo_sapiens
ENSG00000269405 NXF2 nuclear RNA export factor 2 protein_coding Homo_sapiens
ENSG00000269437 NXF2B nuclear RNA export factor 2B protein_coding Homo_sapiens
ENSMUSG00000009941 Nxf2 nuclear RNA export factor 2 protein_coding Mus_musculus
ENSMUSG00000010097 Nxf1 nuclear RNA export factor 1 protein_coding Mus_musculus
ENSMUSG00000031410 Nxf7 nuclear RNA export factor 7 protein_coding Mus_musculus
ENSMUSG00000057000 Nxf3 nuclear RNA export factor 3 protein_coding Mus_musculus

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