C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear RNA export factor 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031410 Nxf7 10090 - X:135579555-135598777 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033784 Nxf7-201 135579787-135593855 protein_coding
  ENSMUST00000113163 Nxf7-001 135579555-135598777 protein_coding
  ENSMUST00000127202 Nxf7-003 135584380-135586133 retained_intron
  ENSMUST00000137977 Nxf7-002 135579555-135588980 protein_coding
  ENSMUST00000141310 Nxf7-004 135588626-135596707 protein_coding
  ENSMUST00000150900 Nxf7-005 135588443-135598758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000033784ENSMUST00000113163ENSMUST00000127202ENSMUST00000137977ENSMUST00000141310ENSMUST00000150900
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000033784 0.011±0.00 0.015±0.00 0.274±0.15 0.136±0.07 N/A 0.019±0.00 0.104±0.00 0.168±0.00 0.033±0.00 15.543±4.15 0.104±0.04
ENSMUST00000113163 N/A N/A 0.333±0.00 N/A N/A N/A 0.046±0.01 N/A 0.014±0.00 31.371±13.26 0.047±0.01
ENSMUST00000127202 N/A 0.243±0.00 N/A 0.115±0.00 N/A N/A 0.111±0.00 N/A N/A N/A 0.103±0.00
ENSMUST00000137977 0.101±0.00 0.008±0.00 0.349±0.06 0.108±0.03 0.020±0.00 N/A 0.029±0.00 0.066±0.03 0.015±0.00 13.382±0.00 0.096±0.03
ENSMUST00000141310 N/A N/A 0.383±0.00 0.217±0.00 N/A N/A N/A 0.159±0.00 N/A N/A 0.564±0.42
ENSMUST00000150900 N/A 0.347±0.32 0.436±0.10 0.343±0.03 N/A N/A 0.167±0.05 0.135±0.01 0.133±0.04 88.409±41.31 0.290±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 ISA RNA binding
GO:0003729 IDA mRNA binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006406 IEA mRNA export from nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055076 nxf1 nuclear RNA export factor 1 protein_coding Danio_rerio
ENSDARG00000086017 NXF1 (2 of 4) protein_coding Danio_rerio
ENSDARG00000089034 NXF1 (3 of 4) protein_coding Danio_rerio
ENSDARG00000095404 NXF1 (4 of 4) protein_coding Danio_rerio
ENSG00000126952 NXF5 nuclear RNA export factor 5 protein_coding Homo_sapiens
ENSG00000269405 NXF2 nuclear RNA export factor 2 protein_coding Homo_sapiens
ENSG00000269437 NXF2B nuclear RNA export factor 2B protein_coding Homo_sapiens

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