C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TSNAX-DISC1 readthrough (NMD candidate)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000270106 TSNAX-DISC1 9606 + 1:231528653-231819244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000602567 TSNAX-DISC1-005 231528653-231819244 nonsense_mediated_decay
  ENST00000602634 TSNAX-DISC1-001 231528653-231819244 nonsense_mediated_decay
  ENST00000602885 TSNAX-DISC1-004 231528653-231819244 nonsense_mediated_decay
  ENST00000602956 TSNAX-DISC1-002 231528653-231819244 nonsense_mediated_decay
  ENST00000602962 TSNAX-DISC1-003 231528653-231819244 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000602956
Transcript ID Bladder
ENST00000602956 0.601±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AY CIL_0006AY_0001 CGP 1:231363751-231819244
CIL_0006B1 CIL_0006B1_0001 CGP 1:231528653-232041272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038995 tsnax translin-associated factor X protein_coding Danio_rerio
ENSMUSG00000056820 Tsnax translin-associated factor X protein_coding Mus_musculus

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