C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: translin-associated factor X
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056820 Tsnax 10090 + 8:125012997-125034192 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075896 Tsnax-201 125012997-125034192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075896 25.878±5.12 21.014±1.57 35.735±2.25 44.944±5.70 17.996±0.82 15.257±2.48 22.000±2.82 16.842±2.85 17.757±8.55 21.080±2.43 37.434±1.04 26.336±5.32 19.153±5.58 13.769±6.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AY CIL_0006AY_0002 CGP 8:124908596-125034192
CIL_00087G CIL_00087G_0002 VISTA 8:124917043-125519851
CIL_0006B1 CIL_0006B1_0002 CGP 8:125012997-125261858

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003697 IEA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0031687 IEA A2A adenosine receptor binding
GO:0032403 IEA protein complex binding
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038995 tsnax translin-associated factor X protein_coding Danio_rerio
ENSG00000116918 TSNAX translin-associated factor X protein_coding Homo_sapiens
ENSG00000270106 TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate) protein_coding Homo_sapiens

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