C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006B1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116918-ENSG00000162946 CGP 9606 1:231528653-232041272
GeneTranscriptPositionBiotype
ENSG00000116918 (TSNAX)
translin-associated factor X 		ENST00000366639 (TSNAX-001) 231528653-231566524 protein_coding
ENST00000413309 (TSNAX-003) 231528655-231561229 protein_coding
ENST00000475168 (TSNAX-002) 231534120-231566524 retained_intron
ENST00000476913 (TSNAX-004) 231529263-231542849 retained_intron
ENST00000602825 (TSNAX-005) 231528667-231554694 processed_transcript
ENSG00000226758 (DISC1-IT1)
DISC1 intronic transcript 1 (non-protein coding) 		ENST00000456782 (DISC1-IT1-001) 231925834-231945233 sense_intronic
ENSG00000229228 (LINC00582)
long intergenic non-protein coding RNA 582 		ENST00000448058 (LINC00582-001) 231591292-231612090 antisense
ENSG00000274121 (DISC2)
Disrupted in schizophrenia 2 conserved region 		ENST00000612827 (DISC2.1-201) 231814982-231815186 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006B1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056820-ENSMUSG00000043051 CGP 10090 8:125012997-125261858
GeneTranscriptPositionBiotype
ENSMUSG00000043051 (Disc1)
disrupted in schizophrenia 1 		ENSMUST00000074562 (Disc1-201) 125054195-125261151 protein_coding
ENSMUST00000075730 (Disc1-202) 125054195-125261151 protein_coding
ENSMUST00000098311 (Disc1-203) 125054195-125261151 protein_coding
ENSMUST00000115885 (Disc1-204) 125054195-125261151 protein_coding
ENSMUST00000117658 (Disc1-002) 125054195-125261858 protein_coding
ENSMUST00000118942 (Disc1-001) 125054195-125261858 protein_coding
ENSMUST00000121953 (Disc1-003) 125054230-125261148 protein_coding
ENSMUST00000122389 (Disc1-004) 125054209-125090995 protein_coding
ENSMUST00000126111 (Disc1-005) 125087987-125102878 processed_transcript
ENSMUSG00000056820 (Tsnax)
translin-associated factor X 		ENSMUST00000075896 (Tsnax-201) 125012997-125034192 protein_coding
ENSMUSG00000086694 (Gm16237)
predicted gene 16237 		ENSMUST00000156666 (Gm16237-001) 125224400-125227323 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006B1_0001ENSG00000116918ENST00000366639ENST00000413309ENST00000475168ENST00000476913ENST00000602825ENSG00000226758ENST00000456782ENSG00000229228ENST00000448058ENSG00000274121ENST00000612827CIL_0006B1_0002ENSMUSG00000043051ENSMUST00000074562ENSMUST00000075730ENSMUST00000098311ENSMUST00000115885ENSMUST00000117658ENSMUST00000118942ENSMUST00000121953ENSMUST00000122389ENSMUST00000126111ENSMUSG00000056820ENSMUST00000075896ENSMUSG00000086694ENSMUST00000156666
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006B1_0001ENSG00000116918ENST00000366639ENST00000475168ENSG00000226758ENST00000456782ENSG00000229228ENST00000448058ENSG00000274121ENST00000612827CIL_0006B1_0002ENSMUSG00000043051ENSMUST00000074562ENSMUST00000075730ENSMUST00000098311ENSMUST00000115885ENSMUST00000117658ENSMUST00000118942ENSMUST00000122389ENSMUST00000126111ENSMUSG00000056820ENSMUST00000075896ENSMUSG00000086694ENSMUST00000156666
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116918 ENST00000366639 13.191±0.00 11.463±0.00 1.503±0.00 11.839±6.28 8.304±2.35 4.851±1.06 6.355±2.79 8.273±4.19 5.867±1.42 4.679±0.45 14.633±12.01 6.297±1.61 5.460±1.54 12.418±2.12
ENST00000413309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475168 N/A N/A N/A N/A N/A 0.834±0.00 N/A 0.484±0.00 N/A 0.997±0.00 0.360±0.00 0.644±0.00 N/A N/A
ENST00000476913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226758 ENST00000456782 0.279±0.00 1.131±0.00 N/A 0.750±0.65 0.446±0.33 0.335±0.06 0.424±0.28 0.615±0.00 0.212±0.00 0.437±0.00 0.147±0.00 1.122±0.64 0.313±0.24 1.673±0.96
ENSG00000229228 ENST00000448058 N/A 0.669±0.00 N/A 0.031±0.00 0.091±0.00 0.137±0.00 0.053±0.00 N/A N/A 0.296±0.00 N/A 0.110±0.05 0.061±0.00 0.187±0.00
ENSG00000274121 ENST00000612827 N/A N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A 0.675±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043051 ENSMUST00000074562 0.317±0.00 N/A N/A N/A N/A 0.110±0.00 N/A N/A 0.060±0.00 N/A N/A 0.401±0.00 0.082±0.00 N/A
ENSMUST00000075730 N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A 0.013±0.00 N/A 0.052±0.00 N/A 0.055±0.00 N/A
ENSMUST00000098311 0.318±0.00 N/A N/A N/A 0.330±0.05 0.110±0.00 0.227±0.00 0.202±0.05 0.041±0.02 N/A N/A 0.276±0.12 0.092±0.01 N/A
ENSMUST00000115885 N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A 0.013±0.00 N/A 0.050±0.00 N/A 0.055±0.00 N/A
ENSMUST00000117658 N/A N/A N/A N/A N/A 0.191±0.00 0.237±0.00 0.174±0.00 0.088±0.01 N/A 0.052±0.00 N/A 0.133±0.00 N/A
ENSMUST00000118942 0.327±0.05 N/A N/A 0.478±0.03 0.221±0.00 0.090±0.00 0.283±0.07 N/A 0.091±0.04 0.769±0.00 0.164±0.02 0.363±0.17 0.208±0.00 0.087±0.00
ENSMUST00000121953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122389 N/A N/A N/A 0.107±0.00 N/A 0.168±0.06 N/A 0.200±0.00 0.036±0.02 N/A 0.078±0.01 0.181±0.00 0.056±0.02 0.022±0.00
ENSMUST00000126111 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A 0.743±0.28 0.235±0.04 N/A
ENSMUSG00000056820 ENSMUST00000075896 25.878±5.12 21.014±1.57 35.735±2.25 44.944±5.70 17.996±0.82 15.257±2.48 22.000±2.82 16.842±2.85 17.757±8.55 21.080±2.43 37.434±1.04 26.336±5.32 19.153±5.58 13.769±6.57
ENSMUSG00000086694 ENSMUST00000156666 0.035±0.01 0.121±0.00 N/A 0.023±0.02 0.113±0.05 0.051±0.01 0.116±0.04 0.072±0.02 0.034±0.01 0.110±0.01 0.041±0.00 0.123±0.07 0.029±0.01 N/A

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