C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TSNAX-DISC1 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602956 TSNAX-DISC1-002 ENSG00000270106 9606 + 1:231528653-231819244 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000602956
Transcript ID Bladder
ENST00000602956 0.601±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AY CIL_0006AY_0001 CGP 1:231363751-231819244
CIL_0006B1 CIL_0006B1_0001 CGP 1:231528653-232041272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075896 Tsnax-201 protein_coding Mus_musculus 0 532
ENSMUST00000119238 Gm5761-001 processed_pseudogene Mus_musculus 0 420

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