C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006AY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135766-ENSG00000270106 CGP 9606 1:231363751-231819244
GeneTranscriptPositionBiotype
ENSG00000116918 (TSNAX)
translin-associated factor X 		ENST00000366639 (TSNAX-001) 231528653-231566524 protein_coding
ENST00000413309 (TSNAX-003) 231528655-231561229 protein_coding
ENST00000475168 (TSNAX-002) 231534120-231566524 retained_intron
ENST00000476913 (TSNAX-004) 231529263-231542849 retained_intron
ENST00000602825 (TSNAX-005) 231528667-231554694 processed_transcript
ENSG00000135766 (EGLN1)
egl-9 family hypoxia-inducible factor 1 		ENST00000366641 (EGLN1-001) 231363751-231425044 protein_coding
ENST00000476717 (EGLN1-002) 231366140-231420343 processed_transcript
ENSG00000223982 (SNRPD2P2)
small nuclear ribonucleoprotein D2 pseudogene 2 		ENST00000473818 (SNRPD2P2-001) 231475956-231476288 processed_pseudogene
ENSG00000229228 (LINC00582)
long intergenic non-protein coding RNA 582 		ENST00000448058 (LINC00582-001) 231591292-231612090 antisense
ENSG00000233461 (RP11-295G20.2)
 ENST00000416221 (RP11-295G20.2-001) 231522388-231528556 antisense
ENST00000425412 (RP11-295G20.2-002) 231527106-231528501 antisense
ENST00000440665 (RP11-295G20.2-003) 231522461-231528255 antisense
ENST00000450783 (RP11-295G20.2-004) 231522461-231528296 antisense
ENST00000454631 (RP11-295G20.2-005) 231522517-231528556 antisense
ENSG00000274121 (DISC2)
Disrupted in schizophrenia 2 conserved region 		ENST00000612827 (DISC2.1-201) 231814982-231815186 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006AY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031987-ENSMUSG00000056820 CGP 10090 8:124908596-125034192
GeneTranscriptPositionBiotype
ENSMUSG00000031987 (Egln1)
egl-9 family hypoxia-inducible factor 1 		ENSMUST00000034469 (Egln1-201) 124908596-124949254 protein_coding
ENSMUSG00000056820 (Tsnax)
translin-associated factor X 		ENSMUST00000075896 (Tsnax-201) 125012997-125034192 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AY_0001ENSG00000116918ENST00000366639ENST00000413309ENST00000475168ENST00000476913ENST00000602825ENSG00000135766ENST00000366641ENST00000476717ENSG00000223982ENST00000473818ENSG00000229228ENST00000448058ENSG00000233461ENST00000416221ENST00000425412ENST00000440665ENST00000450783ENST00000454631ENSG00000274121ENST00000612827CIL_0006AY_0002ENSMUSG00000031987ENSMUST00000034469ENSMUSG00000056820ENSMUST00000075896
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AY_0001ENSG00000116918ENST00000366639ENST00000475168ENSG00000135766ENST00000366641ENST00000476717ENSG00000223982ENST00000473818ENSG00000229228ENST00000448058ENSG00000233461ENST00000416221ENST00000425412ENST00000440665ENST00000450783ENST00000454631ENSG00000274121ENST00000612827CIL_0006AY_0002ENSMUSG00000031987ENSMUST00000034469ENSMUSG00000056820ENSMUST00000075896
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116918 ENST00000366639 13.191±0.00 11.463±0.00 1.503±0.00 11.839±6.28 8.304±2.35 4.851±1.06 6.355±2.79 8.273±4.19 5.867±1.42 4.679±0.45 14.633±12.01 6.297±1.61 5.460±1.54 12.418±2.12
ENST00000413309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475168 N/A N/A N/A N/A N/A 0.834±0.00 N/A 0.484±0.00 N/A 0.997±0.00 0.360±0.00 0.644±0.00 N/A N/A
ENST00000476913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135766 ENST00000366641 1.875±0.00 0.748±0.00 5.040±0.00 5.011±0.00 2.919±0.00 3.263±1.95 4.973±0.57 2.970±1.56 3.929±2.99 2.161±1.53 13.319±3.82 1.474±0.73 1.661±0.44 1.546±0.00
ENST00000476717 N/A N/A N/A 9.615±0.00 7.695±0.00 5.581±0.00 8.500±0.00 9.606±0.00 13.885±0.00 4.272±0.00 13.156±0.00 N/A N/A N/A
ENSG00000223982 ENST00000473818 N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.772±1.82
ENSG00000229228 ENST00000448058 N/A 0.669±0.00 N/A 0.031±0.00 0.091±0.00 0.137±0.00 0.053±0.00 N/A N/A 0.296±0.00 N/A 0.110±0.05 0.061±0.00 0.187±0.00
ENSG00000233461 ENST00000416221 0.707±0.00 2.134±0.00 N/A 0.352±0.00 1.063±0.56 1.868±1.38 0.992±0.26 2.231±0.00 2.575±2.33 1.212±0.00 5.585±0.00 1.797±0.33 2.547±1.46 N/A
ENST00000425412 0.238±0.00 N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A 0.481±0.00 0.808±0.00 1.563±0.00 N/A 6.172±1.43
ENST00000440665 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A 0.508±0.00 N/A N/A 5.091±0.00
ENST00000450783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.154±2.45
ENST00000454631 0.519±0.00 0.785±0.00 N/A 0.404±0.00 1.753±0.00 2.454±0.00 0.615±0.00 1.147±0.00 2.666±0.00 1.299±0.00 N/A 1.255±0.72 1.265±0.65 N/A
ENSG00000274121 ENST00000612827 N/A N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A 0.675±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031987 ENSMUST00000034469 22.740±2.63 13.717±5.47 20.519±1.22 14.734±7.93 20.494±3.73 14.841±4.29 81.989±6.19 21.366±1.78 7.442±1.77 21.961±2.42 78.438±2.70 19.512±6.67 9.105±2.56 2.041±0.71
ENSMUSG00000056820 ENSMUST00000075896 25.878±5.12 21.014±1.57 35.735±2.25 44.944±5.70 17.996±0.82 15.257±2.48 22.000±2.82 16.842±2.85 17.757±8.55 21.080±2.43 37.434±1.04 26.336±5.32 19.153±5.58 13.769±6.57

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