C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000280001 DDX3Y 9606 + Y:12904937-12918122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000623700 DDX3Y-201 12904937-12918122 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverLungOvaryPlacentaTestisENST00000623700
Transcript ID Bladder Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000623700 4.814±0.00 4.221±0.00 4.498±0.00 4.021±0.00 15.157±0.00 11.669±0.00 2.306±0.00 6.334±0.00 76.408±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0002 CGP Y:12904937-13480673

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005774 pl10 pl10 protein_coding Danio_rerio
ENSDARG00000020573 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 protein_coding Danio_rerio
ENSMUSG00000069045 Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked protein_coding Mus_musculus

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