C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycine receptor, alpha 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000263 Glra1 10090 - 11:55514238-55608198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075603 Glra1-003 55514238-55607821 protein_coding
  ENSMUST00000102716 Glra1-002 55514238-55608198 protein_coding
  ENSMUST00000108853 Glra1-001 55514238-55607733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyMuscleOvaryPlacentaTestisENSMUST00000075603ENSMUST00000102716ENSMUST00000108853
Transcript ID Adipose Brain Breast Kidney Muscle Ovary Placenta Testis
ENSMUST00000075603 N/A 0.398±0.00 N/A N/A N/A N/A 0.002±0.00 N/A
ENSMUST00000102716 N/A 0.410±0.19 N/A N/A N/A N/A N/A N/A
ENSMUST00000108853 0.086±0.04 0.685±0.00 0.077±0.02 0.016±0.00 0.034±0.00 0.017±0.00 N/A 0.037±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U9 CIL_0001U9_0002 CGP 11:55469685-55608198
CIL_0001UA CIL_0001UA_0002 CGP 11:55514238-56041010

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001508 IMP action potential
GO:0001964 ISS startle response
GO:0002087 IMP regulation of respiratory gaseous exchange by neurological system process
GO:0005515 IEA protein binding
GO:0005622 IDA intracellular
GO:0005887 ISS integral component of plasma membrane
GO:0006811 ISS ion transport
GO:0006821 ISS chloride transport
GO:0006936 ISS muscle contraction
GO:0007218 ISS neuropeptide signaling pathway
GO:0007268 IMP synaptic transmission
GO:0007340 IMP acrosome reaction
GO:0007601 IMP visual perception
GO:0007628 IMP adult walking behavior
GO:0009897 IDA external side of plasma membrane
GO:0016020 IDA membrane
GO:0016594 ISS glycine binding
GO:0016934 ISS extracellular-glycine-gated chloride channel activity
GO:0022824 IEA transmitter-gated ion channel activity
GO:0030054 IEA cell junction
GO:0030977 ISS taurine binding
GO:0034707 IEA chloride channel complex
GO:0042391 IMP regulation of membrane potential
GO:0043231 ISS intracellular membrane-bounded organelle
GO:0043576 IMP regulation of respiratory gaseous exchange
GO:0045211 IDA postsynaptic membrane
GO:0050884 IMP neuromuscular process controlling posture
GO:0050905 IMP neuromuscular process
GO:0051970 ISS negative regulation of transmission of nerve impulse
GO:0060012 IMP synaptic transmission, glycinergic
GO:0060013 IMP righting reflex
GO:0060077 IDA inhibitory synapse
GO:0060080 IMP regulation of inhibitory postsynaptic membrane potential
GO:1902476 IEA chloride transmembrane transport
GO:2000344 IEA positive regulation of acrosome reaction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012019 glra1 glycine receptor, alpha 1 protein_coding Danio_rerio
ENSG00000145888 GLRA1 glycine receptor, alpha 1 protein_coding Homo_sapiens

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