C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, mannose-binding 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001143 Lman2l 10090 - 1:36422065-36445271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001171 Lman2l-003 36423186-36445271 nonsense_mediated_decay
  ENSMUST00000115011 Lman2l-002 36423186-36445271 protein_coding
  ENSMUST00000123583 Lman2l-006 36428392-36445271 nonsense_mediated_decay
  ENSMUST00000125304 Lman2l-001 36422065-36445271 protein_coding
  ENSMUST00000134594 Lman2l-004 36423186-36441872 retained_intron
  ENSMUST00000152088 Lman2l-005 36424506-36428366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000001171ENSMUST00000115011ENSMUST00000123583ENSMUST00000125304ENSMUST00000134594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000001171 4.891±1.53 6.111±1.48 1.838±0.00 N/A 7.317±3.95 2.246±0.46 N/A 5.611±1.26 1.977±0.67 3.704±0.34 N/A 5.295±1.37 2.531±0.86
ENSMUST00000115011 3.793±1.37 2.969±0.43 4.251±0.44 9.067±1.89 2.193±0.32 2.184±0.82 6.262±0.15 3.360±0.45 1.601±0.67 1.407±0.07 4.612±0.32 4.851±2.49 7.401±4.50
ENSMUST00000123583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.831±10.29
ENSMUST00000125304 2.597±0.54 2.456±0.81 2.057±0.22 4.170±1.66 2.734±0.45 1.376±0.32 1.917±0.24 4.692±0.62 1.448±0.21 1.820±0.21 2.101±0.32 2.993±0.97 2.226±0.92
ENSMUST00000134594 1.525±0.32 1.524±0.23 1.108±0.06 2.896±0.67 1.501±0.31 0.933±0.23 N/A 1.371±0.00 0.667±0.16 1.123±0.13 N/A 2.047±0.50 0.866±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0002 CGP 1:36422065-36508764

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005794 ISS Golgi apparatus
GO:0015031 ISS protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018865 LMAN2L (1 of 2) lectin, mannose-binding 2-like protein_coding Danio_rerio
ENSDARG00000088663 lman2lb lectin, mannose-binding 2-like b protein_coding Danio_rerio
ENSG00000114988 LMAN2L lectin, mannose-binding 2-like protein_coding Homo_sapiens

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