C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114988-ENSG00000158158 CGP 9606 2:96705929-96811891
GeneTranscriptPositionBiotype
ENSG00000114988 (LMAN2L)
lectin, mannose-binding 2-like 		ENST00000264963 (LMAN2L-001) 96705929-96740063 protein_coding
ENST00000377079 (LMAN2L-007) 96706340-96740064 protein_coding
ENST00000434524 (LMAN2L-006) 96705975-96740041 nonsense_mediated_decay
ENST00000434865 (LMAN2L-005) 96707044-96740063 nonsense_mediated_decay
ENST00000440610 (LMAN2L-003) 96707117-96740064 nonsense_mediated_decay
ENST00000446780 (LMAN2L-004) 96706877-96740064 nonsense_mediated_decay
ENST00000449221 (LMAN2L-002) 96707180-96740064 nonsense_mediated_decay
ENST00000474494 (LMAN2L-009) 96707678-96711914 retained_intron
ENST00000480869 (LMAN2L-008) 96711726-96734687 retained_intron
ENSG00000158158 (CNNM4)
cyclin and CBS domain divalent metal cation transport mediator 4 		ENST00000377075 (CNNM4-001) 96760902-96811891 protein_coding
ENST00000482716 (CNNM4-002) 96788590-96797610 processed_transcript
ENST00000493384 (CNNM4-004) 96788619-96799184 processed_transcript
ENST00000496186 (CNNM4-003) 96788590-96808686 processed_transcript
CIL_0003OA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001143-ENSMUSG00000037408 CGP 10090 1:36422065-36508764
GeneTranscriptPositionBiotype
ENSMUSG00000001143 (Lman2l)
lectin, mannose-binding 2-like 		ENSMUST00000001171 (Lman2l-003) 36423186-36445271 nonsense_mediated_decay
ENSMUST00000115011 (Lman2l-002) 36423186-36445271 protein_coding
ENSMUST00000123583 (Lman2l-006) 36428392-36445271 nonsense_mediated_decay
ENSMUST00000125304 (Lman2l-001) 36422065-36445271 protein_coding
ENSMUST00000134594 (Lman2l-004) 36423186-36441872 retained_intron
ENSMUST00000152088 (Lman2l-005) 36424506-36428366 protein_coding
ENSMUSG00000037408 (Cnnm4)
cyclin M4 		ENSMUST00000153128 (Cnnm4-001) 36471620-36508764 protein_coding
ENSMUSG00000037432 (Fer1l5)
fer-1-like 5 (C. elegans) 		ENSMUST00000140452 (Fer1l5-001) 36416888-36422110 processed_transcript
ENSMUST00000179162 (Fer1l5-002) 36372291-36421909 unitary_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OA_0001ENSG00000114988ENST00000264963ENST00000377079ENST00000434524ENST00000434865ENST00000440610ENST00000446780ENST00000449221ENST00000474494ENST00000480869ENSG00000158158ENST00000377075ENST00000482716ENST00000493384ENST00000496186CIL_0003OA_0002ENSMUSG00000001143ENSMUST00000001171ENSMUST00000115011ENSMUST00000123583ENSMUST00000125304ENSMUST00000134594ENSMUST00000152088ENSMUSG00000037408ENSMUST00000153128ENSMUSG00000037432ENSMUST00000140452ENSMUST00000179162
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OA_0001ENSG00000114988ENST00000264963ENST00000434524ENST00000434865ENST00000446780ENST00000449221ENST00000480869ENSG00000158158ENST00000377075ENST00000482716ENST00000493384ENST00000496186CIL_0003OA_0002ENSMUSG00000001143ENSMUST00000001171ENSMUST00000115011ENSMUST00000123583ENSMUST00000125304ENSMUST00000134594ENSMUSG00000037408ENSMUST00000153128ENSMUSG00000037432ENSMUST00000140452ENSMUST00000179162
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114988 ENST00000264963 3.145±0.00 3.333±0.00 2.594±0.00 1.219±0.06 4.929±3.05 7.082±6.47 3.517±1.27 8.666±5.64 3.789±1.14 1.657±1.07 1.772±1.19 11.617±5.48 8.808±1.59 8.269±1.78
ENST00000377079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.174±0.00 N/A
ENST00000434865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.923±0.00
ENST00000440610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 N/A N/A N/A
ENST00000449221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.979±0.00 N/A N/A N/A
ENST00000474494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480869 N/A N/A 4.011±0.00 3.584±0.00 2.697±0.00 1.777±0.00 3.877±0.00 1.660±0.00 5.960±0.00 2.847±0.00 5.040±0.00 13.262±1.89 11.609±0.00 N/A
ENSG00000158158 ENST00000377075 0.640±0.00 1.218±0.00 0.452±0.00 1.390±0.67 1.272±0.13 2.902±2.14 0.997±0.25 1.064±0.89 0.667±0.17 2.059±0.89 3.013±2.00 4.914±3.69 2.574±0.63 7.255±2.92
ENST00000482716 N/A N/A N/A N/A N/A N/A N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493384 N/A N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496186 N/A N/A N/A N/A N/A N/A 1.885±0.00 N/A N/A N/A 3.032±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001143 ENSMUST00000001171 4.891±1.53 6.111±1.48 1.838±0.00 N/A 7.317±3.95 2.246±0.46 N/A 5.611±1.26 1.977±0.67 3.704±0.34 N/A 5.295±1.37 2.531±0.86 N/A
ENSMUST00000115011 3.793±1.37 2.969±0.43 4.251±0.44 9.067±1.89 2.193±0.32 2.184±0.82 6.262±0.15 3.360±0.45 1.601±0.67 1.407±0.07 4.612±0.32 4.851±2.49 7.401±4.50 N/A
ENSMUST00000123583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.831±10.29 N/A
ENSMUST00000125304 2.597±0.54 2.456±0.81 2.057±0.22 4.170±1.66 2.734±0.45 1.376±0.32 1.917±0.24 4.692±0.62 1.448±0.21 1.820±0.21 2.101±0.32 2.993±0.97 2.226±0.92 N/A
ENSMUST00000134594 1.525±0.32 1.524±0.23 1.108±0.06 2.896±0.67 1.501±0.31 0.933±0.23 N/A 1.371±0.00 0.667±0.16 1.123±0.13 N/A 2.047±0.50 0.866±0.18 N/A
ENSMUST00000152088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037408 ENSMUST00000153128 1.848±0.60 1.293±0.24 3.280±0.16 1.028±0.58 2.659±0.30 105.949±12.48 1.294±0.16 6.489±0.58 0.931±0.25 2.669±0.45 0.760±0.31 3.439±1.20 1.788±0.82 5.862±2.04
ENSMUSG00000037432 ENSMUST00000140452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.842±3.57
ENSMUST00000179162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.489±0.72

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