C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114988-ENSG00000158158 CGP 9606 2:96705929-96811891
GeneTranscriptPositionBiotype
ENSG00000114988 (LMAN2L)
lectin, mannose-binding 2-like 		ENST00000264963 (LMAN2L-001) 96705929-96740063 protein_coding
ENST00000377079 (LMAN2L-007) 96706340-96740064 protein_coding
ENST00000434524 (LMAN2L-006) 96705975-96740041 nonsense_mediated_decay
ENST00000434865 (LMAN2L-005) 96707044-96740063 nonsense_mediated_decay
ENST00000440610 (LMAN2L-003) 96707117-96740064 nonsense_mediated_decay
ENST00000446780 (LMAN2L-004) 96706877-96740064 nonsense_mediated_decay
ENST00000449221 (LMAN2L-002) 96707180-96740064 nonsense_mediated_decay
ENST00000474494 (LMAN2L-009) 96707678-96711914 retained_intron
ENST00000480869 (LMAN2L-008) 96711726-96734687 retained_intron
ENSG00000158158 (CNNM4)
cyclin and CBS domain divalent metal cation transport mediator 4 		ENST00000377075 (CNNM4-001) 96760902-96811891 protein_coding
ENST00000482716 (CNNM4-002) 96788590-96797610 processed_transcript
ENST00000493384 (CNNM4-004) 96788619-96799184 processed_transcript
ENST00000496186 (CNNM4-003) 96788590-96808686 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003OA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001143-ENSMUSG00000037408 CGP 10090 1:36422065-36508764
GeneTranscriptPositionBiotype
ENSMUSG00000001143 (Lman2l)
lectin, mannose-binding 2-like 		ENSMUST00000001171 (Lman2l-003) 36423186-36445271 nonsense_mediated_decay
ENSMUST00000115011 (Lman2l-002) 36423186-36445271 protein_coding
ENSMUST00000123583 (Lman2l-006) 36428392-36445271 nonsense_mediated_decay
ENSMUST00000125304 (Lman2l-001) 36422065-36445271 protein_coding
ENSMUST00000134594 (Lman2l-004) 36423186-36441872 retained_intron
ENSMUST00000152088 (Lman2l-005) 36424506-36428366 protein_coding
ENSMUSG00000037408 (Cnnm4)
cyclin M4 		ENSMUST00000153128 (Cnnm4-001) 36471620-36508764 protein_coding
ENSMUSG00000037432 (Fer1l5)
fer-1-like 5 (C. elegans) 		ENSMUST00000140452 (Fer1l5-001) 36416888-36422110 processed_transcript
ENSMUST00000179162 (Fer1l5-002) 36372291-36421909 unitary_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OA_0001ENSG00000114988ENST00000264963ENST00000377079ENST00000434524ENST00000434865ENST00000440610ENST00000446780ENST00000449221ENST00000474494ENST00000480869ENSG00000158158ENST00000377075ENST00000482716ENST00000493384ENST00000496186CIL_0003OA_0002ENSMUSG00000001143ENSMUST00000001171ENSMUST00000115011ENSMUST00000123583ENSMUST00000125304ENSMUST00000134594ENSMUST00000152088ENSMUSG00000037408ENSMUST00000153128ENSMUSG00000037432ENSMUST00000140452ENSMUST00000179162
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OA_0001ENSG00000114988ENST00000264963ENST00000434524ENST00000434865ENST00000446780ENST00000449221ENST00000480869ENSG00000158158ENST00000377075ENST00000482716ENST00000493384ENST00000496186CIL_0003OA_0002ENSMUSG00000001143ENSMUST00000001171ENSMUST00000115011ENSMUST00000123583ENSMUST00000125304ENSMUST00000134594ENSMUSG00000037408ENSMUST00000153128ENSMUSG00000037432ENSMUST00000140452ENSMUST00000179162
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114988 ENST00000264963 3.145±0.00 3.333±0.00 2.594±0.00 1.219±0.06 4.929±3.05 7.082±6.47 3.517±1.27 8.666±5.64 3.789±1.14 1.657±1.07 1.772±1.19 11.617±5.48 8.808±1.59 8.269±1.78
ENST00000377079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.174±0.00 N/A
ENST00000434865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.923±0.00
ENST00000440610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 N/A N/A N/A
ENST00000449221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.979±0.00 N/A N/A N/A
ENST00000474494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480869 N/A N/A 4.011±0.00 3.584±0.00 2.697±0.00 1.777±0.00 3.877±0.00 1.660±0.00 5.960±0.00 2.847±0.00 5.040±0.00 13.262±1.89 11.609±0.00 N/A
ENSG00000158158 ENST00000377075 0.640±0.00 1.218±0.00 0.452±0.00 1.390±0.67 1.272±0.13 2.902±2.14 0.997±0.25 1.064±0.89 0.667±0.17 2.059±0.89 3.013±2.00 4.914±3.69 2.574±0.63 7.255±2.92
ENST00000482716 N/A N/A N/A N/A N/A N/A N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493384 N/A N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496186 N/A N/A N/A N/A N/A N/A 1.885±0.00 N/A N/A N/A 3.032±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001143 ENSMUST00000001171 4.891±1.53 6.111±1.48 1.838±0.00 N/A 7.317±3.95 2.246±0.46 N/A 5.611±1.26 1.977±0.67 3.704±0.34 N/A 5.295±1.37 2.531±0.86 N/A
ENSMUST00000115011 3.793±1.37 2.969±0.43 4.251±0.44 9.067±1.89 2.193±0.32 2.184±0.82 6.262±0.15 3.360±0.45 1.601±0.67 1.407±0.07 4.612±0.32 4.851±2.49 7.401±4.50 N/A
ENSMUST00000123583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.831±10.29 N/A
ENSMUST00000125304 2.597±0.54 2.456±0.81 2.057±0.22 4.170±1.66 2.734±0.45 1.376±0.32 1.917±0.24 4.692±0.62 1.448±0.21 1.820±0.21 2.101±0.32 2.993±0.97 2.226±0.92 N/A
ENSMUST00000134594 1.525±0.32 1.524±0.23 1.108±0.06 2.896±0.67 1.501±0.31 0.933±0.23 N/A 1.371±0.00 0.667±0.16 1.123±0.13 N/A 2.047±0.50 0.866±0.18 N/A
ENSMUST00000152088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037408 ENSMUST00000153128 1.848±0.60 1.293±0.24 3.280±0.16 1.028±0.58 2.659±0.30 105.949±12.48 1.294±0.16 6.489±0.58 0.931±0.25 2.669±0.45 0.760±0.31 3.439±1.20 1.788±0.82 5.862±2.04
ENSMUSG00000037432 ENSMUST00000140452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.842±3.57
ENSMUST00000179162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.489±0.72

Loading