C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125304 Lman2l-001 ENSMUSG00000001143 10090 - 1:36422065-36445271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000125304
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000125304 2.597±0.54 2.456±0.81 2.057±0.22 4.170±1.66 2.734±0.45 1.376±0.32 1.917±0.24 4.692±0.62 1.448±0.21 1.820±0.21 2.101±0.32 2.993±0.97 2.226±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0002 CGP 1:36422065-36508764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005794 ISS Golgi apparatus
GO:0015031 ISS protein transport
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264963 LMAN2L-001 protein_coding Homo_sapiens 0 1321
ENST00000377079 LMAN2L-007 protein_coding Homo_sapiens 0 704
ENST00000434524 LMAN2L-006 nonsense_mediated_decay Homo_sapiens 0 983
ENST00000434865 LMAN2L-005 nonsense_mediated_decay Homo_sapiens 0 985
ENST00000440610 LMAN2L-003 nonsense_mediated_decay Homo_sapiens 0 706
ENST00000446780 LMAN2L-004 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000449221 LMAN2L-002 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000474494 LMAN2L-009 retained_intron Homo_sapiens 0 348
ENST00000480869 LMAN2L-008 retained_intron Homo_sapiens 0 606

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