C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRAM domain containing 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001248 Gramd1a 10090 - 7:31130127-31155896 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001280 Gramd1a-001 31130127-31151050 protein_coding
  ENSMUST00000085636 Gramd1a-201 31130127-31151014 protein_coding
  ENSMUST00000185514 Gramd1a-006 31139821-31151012 nonsense_mediated_decay
  ENSMUST00000185589 Gramd1a-005 31132309-31133314 retained_intron
  ENSMUST00000185985 Gramd1a-003 31130127-31151012 retained_intron
  ENSMUST00000186634 Gramd1a-002 31130127-31151033 nonsense_mediated_decay
  ENSMUST00000186723 Gramd1a-008 31142604-31155896 protein_coding
  ENSMUST00000187679 Gramd1a-007 31141136-31152069 protein_coding
  ENSMUST00000188032 Gramd1a-004 31130127-31151012 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001280ENSMUST00000185514ENSMUST00000185985ENSMUST00000186634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001280 11.343±2.83 11.645±1.81 7.540±0.03 40.378±22.65 20.854±1.58 4.130±0.48 5.069±0.89 4.010±1.03 4.759±2.18 7.423±0.64 5.579±0.34 14.535±0.67 13.326±4.56 4.567±0.92
ENSMUST00000185514 N/A 126.959±31.82 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185985 7.781±2.69 N/A 10.709±1.89 43.962±12.06 14.006±2.67 3.589±0.32 3.041±0.65 2.787±0.55 3.475±2.09 6.695±0.26 2.824±0.72 19.547±14.61 19.573±9.41 2.269±0.60
ENSMUST00000186634 15.126±3.34 36.814±5.65 3.963±0.00 23.433±0.00 45.299±21.61 13.123±1.68 4.106±1.87 5.942±1.07 2.956±1.03 15.297±2.68 N/A 33.932±9.20 2.848±0.00 1.868±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VC CIL_0001VC_0002 CGP 7:31116524-31155896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076689 gramd1a GRAM domain containing 1A protein_coding Danio_rerio
ENSG00000089351 GRAMD1A GRAM domain containing 1A protein_coding Homo_sapiens

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