C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRAM domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001280 Gramd1a-001 ENSMUSG00000001248 10090 - 7:31130127-31151050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001280 11.343±2.83 11.645±1.81 7.540±0.03 40.378±22.65 20.854±1.58 4.130±0.48 5.069±0.89 4.010±1.03 4.759±2.18 7.423±0.64 5.579±0.34 14.535±0.67 13.326±4.56 4.567±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VC CIL_0001VC_0002 CGP 7:31116524-31155896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000108574 GRAMD1B (1 of 2)-201 protein_coding Danio_rerio 0 248
ENST00000317991 GRAMD1A-003 protein_coding Homo_sapiens 0 2457
ENST00000411896 GRAMD1A-004 protein_coding Homo_sapiens 0 2386
ENST00000424536 GRAMD1A-015 protein_coding Homo_sapiens 0 664
ENST00000594597 GRAMD1A-007 processed_transcript Homo_sapiens 0 628
ENST00000598073 GRAMD1A-008 processed_transcript Homo_sapiens 0 588
ENST00000598118 GRAMD1A-005 retained_intron Homo_sapiens 0 1306
ENST00000599476 GRAMD1A-009 retained_intron Homo_sapiens 0 372
ENST00000599564 GRAMD1A-002 protein_coding Homo_sapiens 0 2477
ENST00000600231 GRAMD1A-006 nonsense_mediated_decay Homo_sapiens 0 1600
ENST00000603669 GRAMD1A-013 processed_transcript Homo_sapiens 0 257

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