C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRAM domain containing 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089351 GRAMD1A 9606 + 19:34994784-35026471 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317991 GRAMD1A-003 35000287-35026469 protein_coding
  ENST00000411896 GRAMD1A-004 35000426-35026469 protein_coding
  ENST00000424536 GRAMD1A-015 35000456-35010639 protein_coding
  ENST00000594597 GRAMD1A-007 34999387-35010379 processed_transcript
  ENST00000595596 GRAMD1A-010 35012988-35014365 retained_intron
  ENST00000598073 GRAMD1A-008 35001140-35010339 processed_transcript
  ENST00000598118 GRAMD1A-005 35014969-35026469 retained_intron
  ENST00000598362 GRAMD1A-011 35013607-35014879 retained_intron
  ENST00000598580 GRAMD1A-012 35011484-35013584 retained_intron
  ENST00000599476 GRAMD1A-009 35009673-35010478 retained_intron
  ENST00000599564 GRAMD1A-002 34994784-35026471 protein_coding
  ENST00000600231 GRAMD1A-006 35000323-35026469 nonsense_mediated_decay
  ENST00000603669 GRAMD1A-013 35000372-35009445 processed_transcript
  ENST00000603907 GRAMD1A-014 35023298-35023830 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317991ENST00000411896ENST00000424536ENST00000595596ENST00000598118ENST00000599564ENST00000600231
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317991 N/A N/A N/A 4.960±4.24 N/A N/A N/A N/A 0.863±0.16 N/A N/A 1.206±0.00 N/A N/A
ENST00000411896 8.889±0.00 32.233±0.00 N/A 1.382±0.00 8.469±0.00 N/A 1.923±1.62 6.934±0.00 0.610±0.00 25.271±0.00 5.085±0.00 27.723±19.00 15.591±0.00 11.372±4.50
ENST00000424536 N/A N/A N/A N/A 2.052±0.00 N/A 0.263±0.00 3.646±2.15 2.505±1.67 38.013±0.00 N/A N/A N/A N/A
ENST00000595596 N/A N/A 0.807±0.00 N/A 2.343±0.00 N/A 0.382±0.00 0.833±0.00 N/A N/A N/A N/A N/A N/A
ENST00000598118 N/A N/A 0.749±0.00 N/A N/A 0.280±0.00 N/A N/A N/A N/A 0.455±0.00 N/A N/A N/A
ENST00000599564 N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A 6.200±0.00 N/A N/A N/A
ENST00000600231 N/A 18.927±0.00 N/A 2.883±0.00 5.156±0.00 N/A 4.310±0.00 5.167±0.00 1.767±1.27 36.716±0.00 12.246±0.00 9.750±1.52 4.777±0.22 6.781±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UF CIL_0003UF_0002 CGP 19:34994784-35040448

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076689 gramd1a GRAM domain containing 1A protein_coding Danio_rerio
ENSMUSG00000001248 Gramd1a GRAM domain containing 1A protein_coding Mus_musculus

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