C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRAM domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186634 Gramd1a-002 ENSMUSG00000001248 10090 - 7:31130127-31151033 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000186634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000186634 15.126±3.34 36.814±5.65 3.963±0.00 23.433±0.00 45.299±21.61 13.123±1.68 4.106±1.87 5.942±1.07 2.956±1.03 15.297±2.68 33.932±9.20 2.848±0.00 1.868±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VC CIL_0001VC_0002 CGP 7:31116524-31155896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000108574 GRAMD1B (1 of 2)-201 protein_coding Danio_rerio 0 248
ENST00000317991 GRAMD1A-003 protein_coding Homo_sapiens 0 1709
ENST00000411896 GRAMD1A-004 protein_coding Homo_sapiens 0 1585
ENST00000424536 GRAMD1A-015 protein_coding Homo_sapiens 0 664
ENST00000594597 GRAMD1A-007 processed_transcript Homo_sapiens 0 628
ENST00000598073 GRAMD1A-008 processed_transcript Homo_sapiens 0 588
ENST00000598118 GRAMD1A-005 retained_intron Homo_sapiens 0 808
ENST00000599476 GRAMD1A-009 retained_intron Homo_sapiens 0 372
ENST00000599564 GRAMD1A-002 protein_coding Homo_sapiens 0 1674
ENST00000600231 GRAMD1A-006 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000603669 GRAMD1A-013 processed_transcript Homo_sapiens 0 257

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