C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, beta 6 class V
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001473 Tubb6 10090 + 18:67390717-67402748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001513 Tubb6-201 67390717-67402748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001513 51.302±24.25 102.926±5.08 139.964±21.15 5.942±3.93 51.125±20.29 64.191±16.07 20.212±1.09 8.540±1.40 17.416±12.70 26.706±7.55 8.492±0.78 124.147±53.92 45.234±28.46 20.153±16.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_00025T CIL_00025T_0003 CGP 18:67343564-67402748
CIL_0005DV CIL_0005DV_0002 CGP 18:67390717-67449166

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0051258 IEA protein polymerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055649 tubb6 tubulin, beta 6 class V protein_coding Danio_rerio
ENSG00000176014 TUBB6 tubulin, beta 6 class V protein_coding Homo_sapiens

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