C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ras and Rab interactor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001768 Rin2 10090 + 2:145784734-145887616 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094480 Rin2-201 145786116-145887616 protein_coding
  ENSMUST00000110005 Rin2-002 145785980-145887616 protein_coding
  ENSMUST00000142847 Rin2-003 145784734-145822302 protein_coding
  ENSMUST00000144278 Rin2-007 145822150-145844818 processed_transcript
  ENSMUST00000145874 Rin2-005 145862644-145878974 processed_transcript
  ENSMUST00000147976 Rin2-001 145786116-145887616 nonsense_mediated_decay
  ENSMUST00000149269 Rin2-006 145822289-145845087 processed_transcript
  ENSMUST00000150449 Rin2-004 145786162-145822704 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094480ENSMUST00000110005ENSMUST00000144278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094480 5.132±1.93 2.110±0.94 2.544±0.15 1.825±0.30 8.372±2.48 7.243±2.20 2.046±1.13 3.239±0.75 0.622±0.20 14.362±1.35 0.323±0.00 4.830±2.01 0.648±0.13 1.307±0.37
ENSMUST00000110005 6.565±2.29 2.233±0.58 6.440±2.87 1.771±0.48 6.232±1.72 5.427±2.73 2.781±0.72 5.677±0.96 0.956±0.45 8.248±1.34 0.485±0.21 3.185±1.66 2.266±1.04 0.476±0.07
ENSMUST00000144278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.326±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MY CIL_0002MY_0002 CGP 2:145167754-145887616
CIL_0007Z5 CIL_0007Z5_0002 VISTA 2:145588311-146188756
CIL_0002MT CIL_0002MT_0002 CGP 2:145784734-145916425

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006897 IEA endocytosis
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074589 rin2 Ras and Rab interactor 2 protein_coding Danio_rerio
ENSDARG00000077040 RIN2 (2 of 2) Ras and Rab interactor 2 protein_coding Danio_rerio
ENSG00000132669 RIN2 Ras and Rab interactor 2 protein_coding Homo_sapiens

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