C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ras and Rab interactor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132669 RIN2 9606 + 20:19886521-20002457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000255006 RIN2-003 19886521-20002457 protein_coding
  ENST00000440354 RIN2-201 19889566-20001348 protein_coding
  ENST00000459721 RIN2-002 19889375-19956807 processed_transcript
  ENST00000465815 RIN2-004 19889566-19895947 processed_transcript
  ENST00000467569 RIN2-005 19889387-19970929 processed_transcript
  ENST00000484638 RIN2-001 19935125-20002457 processed_transcript
  ENST00000488077 RIN2-006 19889410-19935550 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000255006ENST00000440354ENST00000484638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000255006 2.406±0.00 2.156±0.00 2.311±0.00 N/A 2.394±1.11 2.120±0.00 2.378±0.93 2.615±0.00 1.429±0.00 5.672±0.59 N/A 4.732±1.96 2.719±1.19 N/A
ENST00000440354 N/A N/A N/A N/A N/A N/A 4.005±0.00 N/A 1.025±0.00 13.925±0.00 2.174±1.26 N/A N/A N/A
ENST00000484638 10.960±0.00 N/A N/A 4.352±2.87 7.558±0.00 3.960±0.00 2.677±0.00 8.572±0.00 N/A 11.901±0.00 2.423±0.00 3.805±0.82 3.441±1.74 2.588±2.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MY CIL_0002MY_0001 CGP 20:19212646-20002457
CIL_0007Z5 CIL_0007Z5_0001 VISTA 20:19702996-20303586
CIL_0002MT CIL_0002MT_0001 CGP 20:19886521-20033655

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005083 NAS small GTPase regulator activity
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006897 IEA endocytosis
GO:0007165 IEA signal transduction
GO:0007264 NAS small GTPase mediated signal transduction
GO:0017112 NAS Rab guanyl-nucleotide exchange factor activity
GO:0032851 NAS positive regulation of Rab GTPase activity
GO:0050790 NAS regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074589 rin2 Ras and Rab interactor 2 protein_coding Danio_rerio
ENSDARG00000077040 RIN2 (2 of 2) Ras and Rab interactor 2 protein_coding Danio_rerio
ENSMUSG00000001768 Rin2 Ras and Rab interactor 2 protein_coding Mus_musculus

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