C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 214
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001855 Nup214 10090 + 2:31974436-32053975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065398 Nup214-001 31974436-32052371 protein_coding
  ENSMUST00000123062 Nup214-007 32025295-32031722 processed_transcript
  ENSMUST00000124455 Nup214-011 32051692-32052365 processed_transcript
  ENSMUST00000126301 Nup214-005 31997961-32004430 processed_transcript
  ENSMUST00000129496 Nup214-003 31979772-31991361 processed_transcript
  ENSMUST00000130185 Nup214-006 32010269-32011642 processed_transcript
  ENSMUST00000130975 Nup214-002 31974486-31979956 processed_transcript
  ENSMUST00000138012 Nup214-008 32033976-32053975 protein_coding
  ENSMUST00000146138 Nup214-010 32050995-32052854 processed_transcript
  ENSMUST00000152791 Nup214-009 32042518-32052367 processed_transcript
  ENSMUST00000153096 Nup214-004 31994821-31998697 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065398ENSMUST00000138012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065398 4.893±2.41 7.841±4.94 1.551±0.01 3.319±0.44 4.728±1.80 4.952±2.69 3.351±0.40 4.547±2.21 2.759±0.70 7.208±2.26 2.233±0.44 12.444±3.72 6.247±4.37 10.086±4.03
ENSMUST00000138012 N/A 5.007±1.09 1.266±0.00 1.674±0.00 N/A 3.191±0.53 N/A 2.056±0.00 1.202±0.16 N/A N/A 5.548±0.69 2.075±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0006IL CIL_0006IL_0002 CGP 2:31950260-32053975
CIL_0002EO CIL_0002EO_0003 CGP 2:31974436-32084857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005487 IMP nucleocytoplasmic transporter activity
GO:0005634 IEA nucleus
GO:0005643 TAS nuclear pore
GO:0005925 IEA focal adhesion
GO:0006406 IMP mRNA export from nucleus
GO:0006606 IMP protein import into nucleus
GO:0006611 IEA protein export from nucleus
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016212 nup214 nucleoporin 214 protein_coding Danio_rerio
ENSG00000126883 NUP214 nucleoporin 214kDa protein_coding Homo_sapiens

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