C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 214
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138012 Nup214-008 ENSMUSG00000001855 10090 + 2:32033976-32053975 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverOvaryPlacentaENSMUST00000138012
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta
ENSMUST00000138012 5.007±1.09 1.266±0.00 1.674±0.00 3.191±0.53 2.056±0.00 1.202±0.16 5.548±0.69 2.075±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0006IL CIL_0006IL_0002 CGP 2:31950260-32053975
CIL_0002EO CIL_0002EO_0003 CGP 2:31974436-32084857

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005487 IMP nucleocytoplasmic transporter activity
GO:0005643 TAS nuclear pore
GO:0006406 IMP mRNA export from nucleus
GO:0006606 IMP protein import into nucleus
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359428 NUP214-001 protein_coding Homo_sapiens 0 1321
ENST00000411637 NUP214-010 protein_coding Homo_sapiens 0 1321
ENST00000451030 NUP214-201 protein_coding Homo_sapiens 0 1321
ENST00000453861 NUP214-028 nonsense_mediated_decay Homo_sapiens 0 1138
ENST00000476004 NUP214-006 protein_coding Homo_sapiens 0 309
ENST00000483497 NUP214-009 protein_coding Homo_sapiens 0 1321
ENST00000498010 NUP214-007 protein_coding Homo_sapiens 0 416
ENST00000530491 NUP214-023 retained_intron Homo_sapiens 0 267

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