C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell death inducing Trp53 target 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004071 Cdip1 10090 - 16:4750348-4790292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004173 Cdip1-001 4765461-4789990 protein_coding
  ENSMUST00000117713 Cdip1-005 4767339-4789930 protein_coding
  ENSMUST00000118703 Cdip1-003 4766841-4790292 protein_coding
  ENSMUST00000140187 Cdip1-004 4766841-4771512 retained_intron
  ENSMUST00000147225 Cdip1-002 4750348-4770097 protein_coding
  ENSMUST00000152667 Cdip1-006 4769309-4790266 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004173ENSMUST00000117713ENSMUST00000118703ENSMUST00000140187ENSMUST00000147225
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004173 15.257±1.08 39.409±7.18 8.472±0.70 8.788±2.22 14.958±3.30 9.596±1.38 10.734±1.45 23.219±1.31 11.509±5.91 14.664±1.34 6.174±0.35 16.935±6.03 9.767±3.63 39.768±1.77
ENSMUST00000117713 10.713±2.16 33.887±9.56 7.317±0.00 19.920±8.33 18.196±9.13 N/A 12.893±1.96 20.454±5.99 12.355±2.10 8.651±1.92 18.758±1.76 15.647±4.36 22.251±0.00 N/A
ENSMUST00000118703 14.151±5.60 25.119±6.91 6.297±0.00 14.228±8.03 15.137±4.42 8.102±1.80 11.328±2.67 14.546±4.00 11.828±6.19 7.784±0.03 16.894±1.08 20.061±7.09 15.353±7.99 N/A
ENSMUST00000140187 6.785±0.15 14.518±1.94 5.759±0.34 6.622±0.75 6.195±0.40 4.745±0.50 N/A N/A 5.205±0.31 5.091±0.44 N/A 9.771±2.11 N/A N/A
ENSMUST00000147225 N/A 59.628±11.71 N/A N/A N/A 14.667±0.95 N/A N/A N/A N/A N/A 30.209±2.97 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009E CIL_00009E_0002 CGP 16:4710059-4766742
CIL_0000TZ CIL_0000TZ_0002 CGP 16:4726361-4790292
CIL_000108 CIL_000108_0002 CGP 16:4750348-4867691

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006915 IEA apoptotic process
GO:0033209 IEA tumor necrosis factor-mediated signaling pathway
GO:0042771 IEA intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076118 CDIP1 cell death-inducing p53 target 1 protein_coding Danio_rerio
ENSG00000089486 CDIP1 cell death-inducing p53 target 1 protein_coding Homo_sapiens

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