C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell death inducing Trp53 target 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004173 Cdip1-001 ENSMUSG00000004071 10090 - 16:4765461-4789990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004173 15.257±1.08 39.409±7.18 8.472±0.70 8.788±2.22 14.958±3.30 9.596±1.38 10.734±1.45 23.219±1.31 11.509±5.91 14.664±1.34 6.174±0.35 16.935±6.03 9.767±3.63 39.768±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009E CIL_00009E_0002 CGP 16:4710059-4766742
CIL_0000TZ CIL_0000TZ_0002 CGP 16:4726361-4790292
CIL_000108 CIL_000108_0002 CGP 16:4750348-4867691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006915 IEA apoptotic process
GO:0033209 IEA tumor necrosis factor-mediated signaling pathway
GO:0042771 IEA intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219700 HMOX2-004 protein_coding Homo_sapiens 0 200
ENST00000398595 HMOX2-003 protein_coding Homo_sapiens 1e-39 169
ENST00000399599 CDIP1-005 protein_coding Homo_sapiens 0 915
ENST00000406590 HMOX2-201 protein_coding Homo_sapiens 0 200
ENST00000414777 HMOX2-202 protein_coding Homo_sapiens 0 200
ENST00000458134 HMOX2-002 protein_coding Homo_sapiens 0 200
ENST00000562334 CDIP1-007 protein_coding Homo_sapiens 0 538
ENST00000563186 CDIP1-011 protein_coding Homo_sapiens 0 398
ENST00000563332 CDIP1-004 protein_coding Homo_sapiens 0 915
ENST00000563507 CDIP1-002 protein_coding Homo_sapiens 0 536
ENST00000564828 CDIP1-006 protein_coding Homo_sapiens 0 324
ENST00000567695 CDIP1-001 protein_coding Homo_sapiens 0 915
ENST00000570622 HMOX2-012 protein_coding Homo_sapiens 0 283
ENST00000570646 HMOX2-001 protein_coding Homo_sapiens 0 200
ENST00000575120 HMOX2-006 protein_coding Homo_sapiens 4e-27 126
ENST00000588381 CDIP1-013 protein_coding Homo_sapiens 0 344
ENST00000589159 CDIP1-018 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000589890 CDIP1-017 protein_coding Homo_sapiens 0 285
ENST00000611166 CDIP1-201 protein_coding Homo_sapiens 0 915
ENST00000612525 HMOX2-206 protein_coding Homo_sapiens 0 200
ENST00000613539 HMOX2-203 protein_coding Homo_sapiens 0 200
ENST00000615778 HMOX2-207 protein_coding Homo_sapiens 0 200
ENST00000617111 HMOX2-208 protein_coding Homo_sapiens 0 200
ENST00000619528 HMOX2-204 protein_coding Homo_sapiens 0 200
ENST00000619913 HMOX2-205 protein_coding Homo_sapiens 0 200
ENST00000620445 HMOX2-209 protein_coding Homo_sapiens 0 200
ENST00000621065 HMOX2-210 protein_coding Homo_sapiens 0 200
ENST00000622146 HMOX2-211 protein_coding Homo_sapiens 0 200

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