C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005354 Txn2 10090 - 15:77915047-77929006 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005487 Txn2-001 77915047-77929006 protein_coding
  ENSMUST00000100486 Txn2-002 77926398-77928997 protein_coding
  ENSMUST00000109747 Txn2-003 77923220-77928974 protein_coding
  ENSMUST00000109748 Txn2-004 77915210-77928968 protein_coding
  ENSMUST00000173561 Txn2-007 77915047-77915700 processed_transcript
  ENSMUST00000173631 Txn2-008 77915047-77927845 protein_coding
  ENSMUST00000174468 Txn2-006 77915204-77927728 protein_coding
  ENSMUST00000174529 Txn2-005 77919534-77927735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005487ENSMUST00000100486ENSMUST00000173631
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005487 99.926±7.74 485.364±30.73 66.422±1.71 47.884±15.47 115.528±38.48 153.198±13.58 132.610±22.29 158.046±9.51 154.841±47.38 66.918±1.73 98.827±6.32 90.999±29.74 56.499±20.86 49.840±22.55
ENSMUST00000100486 N/A 221.003±30.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173631 N/A N/A N/A 178.612±0.00 N/A N/A N/A N/A N/A N/A 25.146±0.00 97.876±70.98 106.549±90.94 139.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EZ CIL_0006EZ_0003 CGP 15:77760587-77929006
CIL_0001W0 CIL_0001W0_0002 CGP 15:77915047-77956722

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0006662 IEA glycerol ether metabolic process
GO:0006979 IEA response to oxidative stress
GO:0007584 IEA response to nutrient
GO:0008113 IEA peptide-methionine (S)-S-oxide reductase activity
GO:0009725 IEA response to hormone
GO:0009749 IEA response to glucose
GO:0014070 IEA response to organic cyclic compound
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0030425 IEA dendrite
GO:0031669 IEA cellular response to nutrient levels
GO:0032403 IEA protein complex binding
GO:0033743 IEA peptide-methionine (R)-S-oxide reductase activity
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0045454 IEA cell redox homeostasis
GO:0048678 IEA response to axon injury
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034777 txn2 thioredoxin 2 protein_coding Danio_rerio
ENSG00000100348 TXN2 thioredoxin 2 protein_coding Homo_sapiens

Loading