C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109748 Txn2-004 ENSMUSG00000005354 10090 - 15:77915210-77928968 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EZ CIL_0006EZ_0003 CGP 15:77760587-77929006
CIL_0001W0 CIL_0001W0_0002 CGP 15:77915047-77956722

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0006662 IEA glycerol ether metabolic process
GO:0006979 IEA response to oxidative stress
GO:0007584 IEA response to nutrient
GO:0008113 IEA peptide-methionine (S)-S-oxide reductase activity
GO:0009725 IEA response to hormone
GO:0009749 IEA response to glucose
GO:0014070 IEA response to organic cyclic compound
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0030425 IEA dendrite
GO:0031669 IEA cellular response to nutrient levels
GO:0032403 IEA protein complex binding
GO:0033743 IEA peptide-methionine (R)-S-oxide reductase activity
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0045454 IEA cell redox homeostasis
GO:0048678 IEA response to axon injury
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216185 TXN2-001 protein_coding Homo_sapiens 0 566
ENST00000403313 TXN2-005 protein_coding Homo_sapiens 0 566
ENST00000416967 TXN2-002 protein_coding Homo_sapiens 0 507
ENST00000487725 TXN2-004 processed_transcript Homo_sapiens 0 488

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