C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100348-ENSG00000100350 CGP 9606 22:36467036-36507101
GeneTranscriptPositionBiotype
ENSG00000100348 (TXN2)
thioredoxin 2 		ENST00000216185 (TXN2-001) 36467036-36482030 protein_coding
ENST00000403313 (TXN2-005) 36467591-36481340 protein_coding
ENST00000411915 (TXN2-003) 36467884-36481596 nonsense_mediated_decay
ENST00000416967 (TXN2-002) 36467046-36481634 protein_coding
ENST00000487725 (TXN2-004) 36467549-36481632 processed_transcript
ENSG00000100350 (FOXRED2)
FAD-dependent oxidoreductase domain containing 2 		ENST00000216187 (FOXRED2-002) 36488242-36507022 protein_coding
ENST00000366463 (FOXRED2-004) 36488599-36498397 protein_coding
ENST00000397223 (FOXRED2-003) 36489987-36506530 protein_coding
ENST00000397224 (FOXRED2-001) 36487190-36507101 protein_coding
ENST00000423980 (FOXRED2-005) 36506164-36507043 protein_coding
CIL_0001W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005354-ENSMUSG00000016552 CGP 10090 15:77915047-77956722
GeneTranscriptPositionBiotype
ENSMUSG00000005354 (Txn2)
thioredoxin 2 		ENSMUST00000005487 (Txn2-001) 77915047-77929006 protein_coding
ENSMUST00000100486 (Txn2-002) 77926398-77928997 protein_coding
ENSMUST00000109747 (Txn2-003) 77923220-77928974 protein_coding
ENSMUST00000109748 (Txn2-004) 77915210-77928968 protein_coding
ENSMUST00000173561 (Txn2-007) 77915047-77915700 processed_transcript
ENSMUST00000173631 (Txn2-008) 77915047-77927845 protein_coding
ENSMUST00000174468 (Txn2-006) 77915204-77927728 protein_coding
ENSMUST00000174529 (Txn2-005) 77919534-77927735 protein_coding
ENSMUSG00000016552 (Foxred2)
FAD-dependent oxidoreductase domain containing 2 		ENSMUST00000016696 (Foxred2-001) 77940522-77956722 protein_coding
ENSMUST00000117725 (Foxred2-002) 77941019-77956675 protein_coding
ENSMUST00000129045 (Foxred2-003) 77952753-77956683 retained_intron
ENSMUST00000140096 (Foxred2-004) 77940526-77945888 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W0_0001ENSG00000100348ENST00000216185ENST00000403313ENST00000411915ENST00000416967ENST00000487725ENSG00000100350ENST00000216187ENST00000366463ENST00000397223ENST00000397224ENST00000423980CIL_0001W0_0002ENSMUSG00000005354ENSMUST00000005487ENSMUST00000100486ENSMUST00000109747ENSMUST00000109748ENSMUST00000173561ENSMUST00000173631ENSMUST00000174468ENSMUST00000174529ENSMUSG00000016552ENSMUST00000016696ENSMUST00000117725ENSMUST00000129045ENSMUST00000140096
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W0_0001ENSG00000100348ENST00000216185ENST00000403313ENST00000416967ENST00000487725ENSG00000100350ENST00000216187ENST00000366463ENST00000397223ENST00000397224CIL_0001W0_0002ENSMUSG00000005354ENSMUST00000005487ENSMUST00000100486ENSMUST00000173631ENSMUSG00000016552ENSMUST00000016696ENSMUST00000117725ENSMUST00000129045ENSMUST00000140096
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100348 ENST00000216185 3.384±0.00 3.953±0.00 0.815±0.00 3.708±2.13 5.046±0.00 2.343±1.37 3.943±2.72 5.676±2.96 3.866±3.65 2.265±1.96 5.404±0.00 13.913±0.00 N/A 6.913±0.00
ENST00000403313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.811±0.00 N/A 5.284±0.00
ENST00000411915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416967 20.886±0.00 28.263±0.00 3.683±0.00 17.108±12.55 17.376±15.73 26.253±0.00 17.631±16.73 18.254±12.30 44.062±0.00 9.902±8.33 22.007±9.76 27.964±20.07 56.204±18.64 22.421±9.81
ENST00000487725 10.212±0.00 N/A N/A N/A 12.587±0.00 N/A N/A 27.017±0.00 N/A N/A N/A 12.337±9.11 20.723±0.00 11.109±0.00
ENSG00000100350 ENST00000216187 N/A N/A 0.217±0.00 N/A 0.206±0.00 N/A N/A N/A N/A N/A 1.057±0.00 N/A N/A N/A
ENST00000366463 N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397223 N/A N/A 0.601±0.00 2.145±0.00 0.306±0.00 0.113±0.00 1.221±0.00 0.507±0.00 N/A N/A 1.704±1.59 0.317±0.00 N/A N/A
ENST00000397224 0.926±0.00 3.371±0.00 N/A 6.198±0.00 1.018±0.64 N/A 0.467±0.00 0.916±0.73 0.640±0.55 0.744±0.23 1.031±0.92 5.039±0.79 1.159±0.09 3.917±3.08
ENST00000423980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005354 ENSMUST00000005487 99.926±7.74 485.364±30.73 66.422±1.71 47.884±15.47 115.528±38.48 153.198±13.58 132.610±22.29 158.046±9.51 154.841±47.38 66.918±1.73 98.827±6.32 90.999±29.74 56.499±20.86 49.840±22.55
ENSMUST00000100486 N/A 221.003±30.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173631 N/A N/A N/A 178.612±0.00 N/A N/A N/A N/A N/A N/A 25.146±0.00 97.876±70.98 106.549±90.94 139.045±0.00
ENSMUST00000174468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000016552 ENSMUST00000016696 1.378±0.41 1.648±0.60 0.793±0.21 2.837±0.95 2.173±1.26 1.267±0.31 0.159±0.07 0.723±0.21 0.437±0.22 0.522±0.14 0.177±0.09 2.257±0.81 0.386±0.40 0.562±0.51
ENSMUST00000117725 0.955±0.09 0.527±0.24 0.318±0.00 1.598±0.49 1.599±0.73 0.670±0.33 0.106±0.07 0.345±0.12 0.108±0.12 0.169±0.05 N/A 0.568±0.13 0.096±0.01 N/A
ENSMUST00000129045 N/A N/A N/A 1.110±0.00 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.032±0.00 N/A
ENSMUST00000140096 0.822±0.31 0.405±0.00 0.552±0.00 1.380±0.14 1.207±0.00 0.502±0.00 0.171±0.04 0.680±0.13 0.148±0.16 0.325±0.14 0.087±0.04 1.331±0.76 0.150±0.08 0.309±0.00

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