C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Williams Beuren syndrome chromosome region 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005378 Wbscr22 10090 - 5:135052957-135064959 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071677 Wbscr22-002 135052959-135064959 protein_coding
  ENSMUST00000085984 Wbscr22-001 135052957-135064666 protein_coding
  ENSMUST00000111205 Wbscr22-012 135052959-135064078 protein_coding
  ENSMUST00000129013 Wbscr22-005 135063737-135064079 processed_transcript
  ENSMUST00000129691 Wbscr22-013 135052957-135056927 protein_coding
  ENSMUST00000134180 Wbscr22-009 135053333-135057019 retained_intron
  ENSMUST00000141309 Wbscr22-004 135061261-135064090 protein_coding
  ENSMUST00000141765 Wbscr22-006 135056049-135061469 processed_transcript
  ENSMUST00000144891 Wbscr22-008 135056480-135064048 retained_intron
  ENSMUST00000147756 Wbscr22-011 135053287-135056727 retained_intron
  ENSMUST00000148549 Wbscr22-003 135059195-135063764 protein_coding
  ENSMUST00000149108 Wbscr22-007 135056886-135061341 retained_intron
  ENSMUST00000151551 Wbscr22-010 135053613-135056913 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085984ENSMUST00000111205ENSMUST00000134180ENSMUST00000144891ENSMUST00000148549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085984 14.208±3.28 16.863±2.85 13.832±2.48 20.990±1.83 15.927±1.88 17.014±2.19 7.364±0.98 15.189±1.64 20.601±6.29 13.370±0.91 10.290±1.57 16.389±5.02 16.401±7.81 10.071±1.57
ENSMUST00000111205 N/A N/A N/A 9.564±0.00 N/A N/A N/A N/A 8.998±1.04 N/A N/A 14.031±1.35 19.629±9.10 3.254±0.00
ENSMUST00000134180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.310±8.93 8.622±0.00
ENSMUST00000144891 N/A N/A N/A N/A N/A 11.678±0.30 N/A N/A N/A N/A N/A 18.582±2.11 N/A N/A
ENSMUST00000148549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.634±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000344 CIL_000344_0002 CGP 5:135023482-135064959

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0016568 IEA chromatin modification
GO:0032259 IEA methylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063596 wbscr22 Williams Beuren syndrome chromosome region 22 protein_coding Danio_rerio
ENSG00000071462 WBSCR22 Williams Beuren syndrome chromosome region 22 protein_coding Homo_sapiens

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