C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: capicua homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005442 Cic 10090 + 7:25267704-25294159 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005578 Cic-201 25282179-25294148 protein_coding
  ENSMUST00000163320 Cic-002 25282179-25294145 protein_coding
  ENSMUST00000163819 Cic-010 25283217-25285195 processed_transcript
  ENSMUST00000163901 Cic-013 25293020-25294145 protein_coding
  ENSMUST00000164440 Cic-007 25279641-25284932 protein_coding
  ENSMUST00000164820 Cic-014 25291171-25294145 protein_coding
  ENSMUST00000165239 Cic-015 25282810-25291342 protein_coding
  ENSMUST00000165742 Cic-005 25289263-25289706 retained_intron
  ENSMUST00000167162 Cic-011 25291935-25292461 retained_intron
  ENSMUST00000167379 Cic-004 25285823-25294142 retained_intron
  ENSMUST00000168956 Cic-008 25284670-25285684 nonsense_mediated_decay
  ENSMUST00000169266 Cic-001 25267704-25294159 protein_coding
  ENSMUST00000169392 Cic-006 25268387-25271272 protein_coding
  ENSMUST00000169743 Cic-009 25278422-25284969 processed_transcript
  ENSMUST00000170500 Cic-012 25291208-25292078 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005578ENSMUST00000163320ENSMUST00000165239ENSMUST00000167379ENSMUST00000169266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.606±0.31 N/A N/A N/A
ENSMUST00000163320 2.791±1.23 N/A 2.796±0.77 7.344±2.61 3.413±0.87 1.988±0.33 1.192±0.23 1.267±0.10 1.761±0.48 4.114±0.81 1.505±0.51 4.747±1.04 2.404±0.75 2.317±0.17
ENSMUST00000165239 N/A 7.122±0.35 N/A N/A 4.217±0.00 N/A N/A N/A 1.042±0.00 N/A 2.421±0.00 7.433±2.02 7.296±0.99 0.959±0.00
ENSMUST00000167379 4.715±0.92 7.760±0.74 3.917±0.74 10.015±4.63 7.715±1.44 6.791±0.78 2.583±1.25 3.365±0.12 2.026±1.03 7.466±1.48 1.332±0.20 9.483±3.37 1.885±0.68 2.396±0.93
ENSMUST00000169266 3.890±1.60 8.682±2.78 2.894±1.37 5.476±2.34 10.298±4.66 6.394±1.73 2.047±0.62 3.141±0.67 1.391±0.30 5.129±2.03 2.247±0.92 5.227±2.14 2.878±2.56 3.675±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000287 CIL_000287_0002 CGP 7:25242561-25294159
CIL_0005V7 CIL_0005V7_0002 CGP 7:25267704-25297986

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0048286 IGI lung alveolus development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055502 cicb capicua homolog b (Drosophila) protein_coding Danio_rerio
ENSDARG00000071150 cica capicua homolog a (Drosophila) protein_coding Danio_rerio
ENSG00000079432 CIC capicua transcriptional repressor protein_coding Homo_sapiens

Loading