C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005V7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000079432-ENSG00000079462 CGP 9606 19:42268537-42303546
GeneTranscriptPositionBiotype
ENSG00000079432 (CIC)
capicua transcriptional repressor 		ENST00000160740 (CIC-005) 42284020-42295796 protein_coding
ENST00000571033 (CIC-003) 42294460-42295005 retained_intron
ENST00000571942 (CIC-008) 42269224-42272216 protein_coding
ENST00000572681 (CIC-002) 42268537-42295796 protein_coding
ENST00000573349 (CIC-007) 42293607-42295110 protein_coding
ENST00000575287 (CIC-004) 42293751-42295135 nonsense_mediated_decay
ENST00000575354 (CIC-001) 42284665-42295797 protein_coding
ENST00000575839 (CIC-009) 42279992-42286893 processed_transcript
ENST00000576505 (CIC-006) 42293657-42295534 protein_coding
ENSG00000079462 (PAFAH1B3)
platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 		ENST00000262890 (PAFAH1B3-001) 42297033-42302571 protein_coding
ENST00000538771 (PAFAH1B3-201) 42297033-42302777 protein_coding
ENST00000594989 (PAFAH1B3-007) 42297036-42302292 protein_coding
ENST00000595530 (PAFAH1B3-004) 42297280-42302770 protein_coding
ENST00000596265 (PAFAH1B3-006) 42297316-42302728 protein_coding
ENST00000597333 (PAFAH1B3-005) 42299917-42302496 retained_intron
ENST00000599778 (PAFAH1B3-002) 42300171-42303546 protein_coding
ENST00000601865 (PAFAH1B3-003) 42300089-42302777 protein_coding
ENSG00000188368 (PRR19)
proline rich 19 		ENST00000341747 (PRR19-201) 42302132-42310821 protein_coding
ENST00000499536 (PRR19-002) 42308774-42310814 protein_coding
ENST00000595750 (PRR19-003) 42306953-42310288 protein_coding
ENST00000598490 (PRR19-001) 42302098-42310813 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005V7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005442-ENSMUSG00000005447 CGP 10090 7:25267704-25297986
GeneTranscriptPositionBiotype
ENSMUSG00000005442 (Cic)
capicua homolog (Drosophila) 		ENSMUST00000005578 (Cic-201) 25282179-25294148 protein_coding
ENSMUST00000163320 (Cic-002) 25282179-25294145 protein_coding
ENSMUST00000163819 (Cic-010) 25283217-25285195 processed_transcript
ENSMUST00000163901 (Cic-013) 25293020-25294145 protein_coding
ENSMUST00000164440 (Cic-007) 25279641-25284932 protein_coding
ENSMUST00000164820 (Cic-014) 25291171-25294145 protein_coding
ENSMUST00000165239 (Cic-015) 25282810-25291342 protein_coding
ENSMUST00000165742 (Cic-005) 25289263-25289706 retained_intron
ENSMUST00000167162 (Cic-011) 25291935-25292461 retained_intron
ENSMUST00000167379 (Cic-004) 25285823-25294142 retained_intron
ENSMUST00000168956 (Cic-008) 25284670-25285684 nonsense_mediated_decay
ENSMUST00000169266 (Cic-001) 25267704-25294159 protein_coding
ENSMUST00000169392 (Cic-006) 25268387-25271272 protein_coding
ENSMUST00000169743 (Cic-009) 25278422-25284969 processed_transcript
ENSMUST00000170500 (Cic-012) 25291208-25292078 retained_intron
ENSMUSG00000005447 (Pafah1b3)
platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 		ENSMUST00000005583 (Pafah1b3-001) 25295049-25297986 protein_coding
ENSMUST00000108410 (Pafah1b3-007) 25295049-25297312 protein_coding
ENSMUST00000140093 (Pafah1b3-008) 25295049-25296702 retained_intron
ENSMUST00000148150 (Pafah1b3-005) 25295359-25297882 protein_coding
ENSMUST00000148828 (Pafah1b3-004) 25296620-25297921 retained_intron
ENSMUST00000149634 (Pafah1b3-003) 25296874-25297934 processed_transcript
ENSMUST00000155118 (Pafah1b3-002) 25295966-25297937 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005V7_0001ENSG00000079432ENST00000160740ENST00000571033ENST00000571942ENST00000572681ENST00000573349ENST00000575287ENST00000575354ENST00000575839ENST00000576505ENSG00000079462ENST00000262890ENST00000538771ENST00000594989ENST00000595530ENST00000596265ENST00000597333ENST00000599778ENST00000601865ENSG00000188368ENST00000341747ENST00000499536ENST00000595750ENST00000598490CIL_0005V7_0002ENSMUSG00000005442ENSMUST00000005578ENSMUST00000163320ENSMUST00000163819ENSMUST00000163901ENSMUST00000164440ENSMUST00000164820ENSMUST00000165239ENSMUST00000165742ENSMUST00000167162ENSMUST00000167379ENSMUST00000168956ENSMUST00000169266ENSMUST00000169392ENSMUST00000169743ENSMUST00000170500ENSMUSG00000005447ENSMUST00000005583ENSMUST00000108410ENSMUST00000140093ENSMUST00000148150ENSMUST00000148828ENSMUST00000149634ENSMUST00000155118
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005V7_0001ENSG00000079432ENST00000160740ENST00000572681ENST00000573349ENST00000575354ENST00000576505ENSG00000079462ENST00000262890ENST00000538771ENST00000594989ENST00000595530ENST00000596265ENST00000599778ENST00000601865ENSG00000188368ENST00000341747ENST00000499536ENST00000595750ENST00000598490CIL_0005V7_0002ENSMUSG00000005442ENSMUST00000005578ENSMUST00000163320ENSMUST00000165239ENSMUST00000167379ENSMUST00000169266ENSMUSG00000005447ENSMUST00000005583ENSMUST00000108410ENSMUST00000140093ENSMUST00000148150ENSMUST00000148828ENSMUST00000155118
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079432 ENST00000160740 N/A N/A N/A 3.048±0.00 N/A 2.923±0.00 3.037±0.00 1.250±0.00 N/A 2.178±1.39 2.844±0.00 10.771±0.00 N/A N/A
ENST00000571033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572681 6.921±0.00 4.399±0.00 N/A 1.375±0.00 2.670±1.99 2.711±0.00 0.606±0.00 1.592±0.00 N/A N/A 2.260±1.79 7.370±4.19 2.588±0.89 4.692±1.99
ENST00000573349 N/A N/A N/A N/A N/A 1.997±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575354 10.296±0.00 14.628±0.00 0.661±0.00 4.506±3.47 4.561±2.66 8.022±0.00 1.779±0.00 5.687±0.00 1.772±0.68 8.031±0.00 2.806±1.55 18.476±19.70 8.214±0.82 18.354±2.02
ENST00000575839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576505 N/A N/A N/A N/A N/A N/A N/A 5.534±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000079462 ENST00000262890 1.088±0.00 N/A N/A 6.340±0.00 1.925±0.00 2.310±0.00 0.412±0.00 2.925±0.00 N/A N/A N/A 10.101±4.83 6.994±0.00 N/A
ENST00000538771 N/A 10.003±0.00 N/A 0.854±0.00 0.907±0.07 3.228±0.00 0.258±0.00 N/A N/A 2.835±0.00 N/A 8.283±4.73 4.543±2.67 13.448±3.18
ENST00000594989 1.457±0.00 N/A N/A 7.386±3.03 2.149±0.00 2.398±0.00 N/A 7.531±0.00 2.003±0.00 0.981±0.00 2.481±0.00 N/A 2.754±0.00 16.115±0.00
ENST00000595530 1.240±0.00 N/A 1.164±0.00 1.717±0.00 1.130±0.00 2.881±0.13 N/A 5.641±0.00 N/A N/A 0.986±0.61 9.443±4.61 6.445±3.38 13.823±0.00
ENST00000596265 N/A N/A N/A 1.917±0.00 N/A 2.173±0.00 N/A 0.785±0.00 N/A 0.158±0.00 N/A N/A N/A N/A
ENST00000597333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.559±0.00 N/A N/A
ENST00000601865 N/A N/A 0.154±0.00 N/A N/A 1.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188368 ENST00000341747 0.543±0.00 N/A N/A 0.623±0.00 N/A N/A 0.213±0.00 1.669±0.00 0.182±0.00 0.464±0.00 0.722±0.53 2.327±1.30 1.501±0.33 12.830±0.39
ENST00000499536 0.235±0.00 N/A N/A N/A 0.517±0.00 N/A 0.272±0.00 N/A 0.171±0.00 0.208±0.00 N/A N/A N/A N/A
ENST00000595750 N/A N/A N/A N/A N/A N/A N/A 0.974±0.00 N/A N/A N/A N/A N/A N/A
ENST00000598490 N/A 2.914±0.00 N/A N/A N/A 0.438±0.00 N/A N/A N/A 0.280±0.00 N/A N/A 1.396±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005442 ENSMUST00000005578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.606±0.31 N/A N/A N/A
ENSMUST00000163320 2.791±1.23 N/A 2.796±0.77 7.344±2.61 3.413±0.87 1.988±0.33 1.192±0.23 1.267±0.10 1.761±0.48 4.114±0.81 1.505±0.51 4.747±1.04 2.404±0.75 2.317±0.17
ENSMUST00000163819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165239 N/A 7.122±0.35 N/A N/A 4.217±0.00 N/A N/A N/A 1.042±0.00 N/A 2.421±0.00 7.433±2.02 7.296±0.99 0.959±0.00
ENSMUST00000165742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167379 4.715±0.92 7.760±0.74 3.917±0.74 10.015±4.63 7.715±1.44 6.791±0.78 2.583±1.25 3.365±0.12 2.026±1.03 7.466±1.48 1.332±0.20 9.483±3.37 1.885±0.68 2.396±0.93
ENSMUST00000168956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169266 3.890±1.60 8.682±2.78 2.894±1.37 5.476±2.34 10.298±4.66 6.394±1.73 2.047±0.62 3.141±0.67 1.391±0.30 5.129±2.03 2.247±0.92 5.227±2.14 2.878±2.56 3.675±0.27
ENSMUST00000169392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000005447 ENSMUST00000005583 12.253±10.42 9.059±2.29 17.974±1.31 91.615±59.25 8.421±1.97 50.629±3.95 1.930±0.74 12.311±1.37 10.914±10.28 15.592±1.04 0.360±0.34 28.446±12.41 25.943±11.97 14.220±1.78
ENSMUST00000108410 1.739±0.33 5.423±2.18 N/A 70.891±43.85 9.700±2.27 49.878±8.13 1.160±0.57 9.714±1.93 3.489±1.61 5.983±0.33 0.212±0.12 34.705±4.64 17.582±7.46 5.476±0.05
ENSMUST00000140093 N/A 2.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.05 N/A N/A N/A
ENSMUST00000148150 2.598±2.00 3.206±1.11 6.053±0.00 45.124±27.83 3.342±1.05 12.831±1.37 0.454±0.00 N/A 4.212±0.77 3.602±0.75 0.196±0.08 11.743±4.66 9.816±2.40 4.523±0.95
ENSMUST00000148828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.01 N/A N/A N/A
ENSMUST00000149634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A 8.414±0.77 N/A

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