C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal L1 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005846 Rsl1d1 10090 - 16:11192970-11203331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000119953 Rsl1d1-001 11192970-11203331 protein_coding
  ENSMUST00000124454 Rsl1d1-003 11196444-11203264 retained_intron
  ENSMUST00000129962 Rsl1d1-002 11193505-11194995 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119953ENSMUST00000124454ENSMUST00000129962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119953 7.267±1.96 2.030±0.34 25.263±3.20 19.608±8.06 5.194±1.94 3.231±0.52 6.730±0.56 5.447±1.39 19.661±18.06 4.668±0.41 17.431±0.90 10.561±11.91 32.904±11.80 5.067±0.90
ENSMUST00000124454 N/A N/A N/A N/A N/A 1.717±0.00 N/A N/A 2.912±0.64 N/A N/A 2.076±0.22 N/A 1.651±0.00
ENSMUST00000129962 N/A 1.782±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.530±0.52 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DT CIL_0007DT_0002 CGP 16:11136592-11203331
CIL_0001KD CIL_0001KD_0002 CGP 16:11192970-11254270

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0016020 IEA membrane
GO:0032880 ISO regulation of protein localization
GO:0042981 ISS regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding
GO:2000772 ISS regulation of cellular senescence

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055868 RSL1D1 ribosomal L1 domain containing 1 protein_coding Danio_rerio
ENSG00000171490 RSL1D1 ribosomal L1 domain containing 1 protein_coding Homo_sapiens

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