C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 2, group C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113460 Nr2c2-001 ENSMUSG00000005893 10090 + 6:92091390-92173057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113460
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113460 1.420±0.00 3.208±0.95 1.666±0.03 2.574±0.41 2.112±0.18 1.600±0.40 1.367±0.08 1.310±0.65 1.501±0.06 1.180±0.22 2.298±0.47 0.923±0.23 0.930±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AG CIL_0005AG_0002 CGP 6:91978878-92173057
CIL_0005AF CIL_0005AF_0002 CGP 6:92091390-92184033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0021549 IMP cerebellum development
GO:0030154 IEA cell differentiation
GO:0040019 IMP positive regulation of embryonic development
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048520 IMP positive regulation of behavior
GO:0051321 IMP meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011597 nr2c2-201 protein_coding Danio_rerio 0 702
ENSDART00000125232 nr2c2-001 protein_coding Danio_rerio 0 702
ENST00000253686 MRPS25-001 protein_coding Homo_sapiens 0 377
ENST00000323373 NR2C2-001 protein_coding Homo_sapiens 0 2475
ENST00000393102 NR2C2-004 protein_coding Homo_sapiens 0 2651
ENST00000406272 NR2C2-201 protein_coding Homo_sapiens 0 2571
ENST00000413118 NR2C2-006 protein_coding Homo_sapiens 0 375
ENST00000413194 NR2C2-012 protein_coding Homo_sapiens 0 560
ENST00000425241 NR2C2-002 protein_coding Homo_sapiens 0 2651
ENST00000435454 NR2C2-008 protein_coding Homo_sapiens 5.00264e-43 178
ENST00000437120 NR2C2-009 protein_coding Homo_sapiens 0 684
ENST00000439011 NR2C2-011 protein_coding Homo_sapiens 0 665
ENST00000475707 NR2C2-003 retained_intron Homo_sapiens 0 2078
ENST00000478572 NR2C2-005 processed_transcript Homo_sapiens 0 1408
ENST00000495282 NR2C2-010 retained_intron Homo_sapiens 0 291
ENST00000617312 NR2C2-202 protein_coding Homo_sapiens 0 2475

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