C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin alpha 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007440 Pcdha10 10090 + 18:36930285-37187657 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007584 Pcdha10-201 37090136-37187657 protein_coding
  ENSMUST00000047479 Pcdha10-202 37143969-37187657 protein_coding
  ENSMUST00000047614 Pcdha10-203 37020230-37187657 protein_coding
  ENSMUST00000070797 Pcdha10-204 36930285-37185256 protein_coding
  ENSMUST00000115657 Pcdha10-205 37010858-37187657 protein_coding
  ENSMUST00000115658 Pcdha10-206 37005320-37187657 protein_coding
  ENSMUST00000115659 Pcdha10-207 36997880-37187657 protein_coding
  ENSMUST00000115661 Pcdha10-208 36952766-37185256 protein_coding
  ENSMUST00000115662 Pcdha10-209 36939318-37185256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007584ENSMUST00000047479ENSMUST00000047614ENSMUST00000070797ENSMUST00000115657ENSMUST00000115658ENSMUST00000115659ENSMUST00000115661ENSMUST00000115662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007584 N/A N/A N/A N/A N/A 0.084±0.00 0.027±0.01 0.041±0.00 N/A N/A 0.021±0.00 N/A N/A N/A
ENSMUST00000047479 0.171±0.02 0.600±0.21 0.346±0.00 10.290±2.60 0.215±0.07 0.272±0.03 0.073±0.01 0.062±0.03 0.014±0.01 3.983±0.27 0.007±0.00 0.069±0.02 0.069±0.04 N/A
ENSMUST00000047614 N/A 0.344±0.04 N/A 8.318±1.48 N/A 0.086±0.02 0.019±0.01 0.018±0.00 0.017±0.01 N/A 0.008±0.00 0.089±0.03 0.023±0.00 3.515±1.51
ENSMUST00000070797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.889±0.11
ENSMUST00000115657 N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115658 0.100±0.05 0.383±0.07 N/A 6.532±0.00 0.056±0.01 0.229±0.00 0.029±0.00 0.024±0.01 0.011±0.01 N/A 0.002±0.00 0.100±0.04 N/A N/A
ENSMUST00000115659 0.152±0.02 0.449±0.04 N/A 7.258±1.03 0.063±0.00 0.162±0.07 0.029±0.02 0.053±0.03 0.010±0.01 N/A 0.028±0.00 0.134±0.06 N/A N/A
ENSMUST00000115661 0.412±0.15 0.331±0.02 N/A N/A 0.151±0.05 0.188±0.06 N/A 0.035±0.00 0.010±0.00 N/A N/A 0.208±0.07 N/A N/A
ENSMUST00000115662 N/A N/A N/A N/A N/A 0.187±0.00 N/A 0.027±0.00 N/A N/A N/A 0.067±0.02 0.031±0.00 8.778±3.49

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

No Homologs available.

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