C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S15A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008683 Rps15a 10090 - 7:118104378-118116186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106588 Rps15a-004 118109064-118115677 protein_coding
  ENSMUST00000106590 Rps15a-005 118109169-118115554 protein_coding
  ENSMUST00000128482 Rps15a-003 118114785-118116128 protein_coding
  ENSMUST00000131374 Rps15a-001 118105828-118116186 protein_coding
  ENSMUST00000131840 Rps15a-002 118114789-118116129 protein_coding
  ENSMUST00000134270 Rps15a-006 118109663-118115228 retained_intron
  ENSMUST00000172457 Rps15a-201 118104378-118115256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106588ENSMUST00000128482ENSMUST00000131374ENSMUST00000131840ENSMUST00000172457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106588 47.017±17.44 N/A 224.765±89.48 115.572±43.24 68.948±28.57 30.724±8.12 30.774±8.55 46.108±10.26 173.463±204.13 48.242±9.32 117.932±23.53 581.051±72.26 406.321±258.96 56.677±8.58
ENSMUST00000128482 755.878±401.81 64.079±10.73 1532.980±677.90 1108.215±7.11 911.207±0.00 471.537±75.33 294.070±79.55 520.252±141.77 806.807±810.70 520.772±25.95 169.684±49.89 1567.375±1084.39 1574.870±709.53 719.184±61.74
ENSMUST00000131374 28.068±0.00 4.533±0.95 29.399±0.00 18.641±0.00 N/A 13.718±2.73 7.884±0.00 11.741±1.70 20.733±20.63 14.994±0.46 5.676±1.02 37.616±0.00 42.637±0.00 11.408±0.00
ENSMUST00000131840 N/A 2.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172457 N/A N/A N/A 9.553±1.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QM CIL_0003QM_0002 CGP 7:117380979-118116186

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005737 IEA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008284 IEA positive regulation of cell proliferation
GO:0009615 IEA response to virus
GO:0016020 IEA membrane
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0045787 IEA positive regulation of cell cycle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010160 rps15a ribosomal protein S15a protein_coding Danio_rerio
ENSG00000134419 RPS15A ribosomal protein S15a protein_coding Homo_sapiens

Loading