C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S15a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010160 rps15a 7955 - 3:26666187-26672111 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000018822 rps15a-002 26666380-26668188 retained_intron
  ENSDART00000128613 rps15a-001 26666187-26672111 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000018822ENSDART00000128613
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000018822 N/A 0.338±0.00 0.692±0.46 N/A N/A
ENSDART00000128613 95.297±92.06 488.846±499.90 346.212±484.88 418.285±0.00 429.841±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QM CIL_0003QM_0001 CGP 3:26492909-26672111

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0007420 IMP brain development
GO:0009790 IMP embryo development
GO:0030529 IEA ribonucleoprotein complex
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134419 RPS15A ribosomal protein S15a protein_coding Homo_sapiens
ENSMUSG00000008683 Rps15a ribosomal protein S15A protein_coding Mus_musculus

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