C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ewing sarcoma breakpoint region 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009079 Ewsr1 10090 - 11:5069689-5099266 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063232 Ewsr1-010 5090459-5099096 protein_coding
  ENSMUST00000073308 Ewsr1-007 5069698-5099067 protein_coding
  ENSMUST00000079949 Ewsr1-002 5069689-5099266 protein_coding
  ENSMUST00000093365 Ewsr1-004 5080418-5099066 protein_coding
  ENSMUST00000102930 Ewsr1-009 5069897-5099042 protein_coding
  ENSMUST00000130060 Ewsr1-005 5070690-5072220 processed_transcript
  ENSMUST00000130118 Ewsr1-003 5069974-5070891 processed_transcript
  ENSMUST00000139886 Ewsr1-013 5071520-5079899 processed_transcript
  ENSMUST00000141002 Ewsr1-012 5071107-5079528 processed_transcript
  ENSMUST00000144238 Ewsr1-011 5082022-5086036 processed_transcript
  ENSMUST00000150168 Ewsr1-006 5071520-5082340 processed_transcript
  ENSMUST00000151497 Ewsr1-001 5071417-5078521 processed_transcript
  ENSMUST00000151847 Ewsr1-008 5093532-5099067 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073308ENSMUST00000079949ENSMUST00000093365ENSMUST00000102930ENSMUST00000130118ENSMUST00000139886ENSMUST00000141002ENSMUST00000150168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073308 21.637±10.22 28.637±0.10 50.513±27.51 39.857±1.30 30.327±0.82 33.216±3.69 14.422±0.11 25.827±3.43 26.331±15.42 38.889±2.83 11.375±3.27 45.958±10.82 37.377±22.44 39.772±6.55
ENSMUST00000079949 N/A N/A 19.796±1.85 22.625±2.34 N/A N/A N/A 10.488±0.19 30.620±8.06 N/A 8.587±0.36 N/A 16.203±1.64 32.425±8.64
ENSMUST00000093365 66.905±26.54 216.945±42.38 N/A 69.076±23.34 177.048±16.76 101.899±11.86 33.250±12.59 52.794±15.58 52.419±29.04 100.117±13.74 N/A 333.652±151.23 N/A 132.253±30.81
ENSMUST00000102930 N/A N/A N/A 38.319±14.45 N/A N/A N/A N/A N/A N/A 11.261±2.60 N/A 54.964±25.16 96.866±0.00
ENSMUST00000130118 N/A N/A N/A 139.894±0.00 N/A N/A N/A N/A N/A N/A N/A 348.135±0.00 173.678±36.22 561.270±0.00
ENSMUST00000139886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 87.637±0.00 N/A
ENSMUST00000141002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 103.017±0.00 N/A N/A
ENSMUST00000150168 N/A N/A N/A 124.617±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 159.954±55.14 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VR CIL_0003VR_0002 CGP 11:5069689-5106093

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020258 ewsr1a Ewing sarcoma breakpoint region 1a protein_coding Danio_rerio
ENSDARG00000020465 ewsr1b Ewing sarcoma breakpoint region 1b protein_coding Danio_rerio
ENSG00000182944 EWSR1 EWS RNA-binding protein 1 protein_coding Homo_sapiens

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