C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ewing sarcoma breakpoint region 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073308 Ewsr1-007 ENSMUSG00000009079 10090 - 11:5069698-5099067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073308 21.637±10.22 28.637±0.10 50.513±27.51 39.857±1.30 30.327±0.82 33.216±3.69 14.422±0.11 25.827±3.43 26.331±15.42 38.889±2.83 11.375±3.27 45.958±10.82 37.377±22.44 39.772±6.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VR CIL_0003VR_0002 CGP 11:5069689-5106093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331029 EWSR1-007 protein_coding Homo_sapiens 0 3090
ENST00000332035 EWSR1-008 protein_coding Homo_sapiens 0 1559
ENST00000332050 EWSR1-201 protein_coding Homo_sapiens 0 1589
ENST00000333395 EWSR1-004 protein_coding Homo_sapiens 0 1461
ENST00000360091 EWSR1-019 protein_coding Homo_sapiens 0 749
ENST00000397938 EWSR1-001 protein_coding Homo_sapiens 0 1589
ENST00000400979 RP11-9L18.2-001 processed_pseudogene Homo_sapiens 0 1315
ENST00000406548 EWSR1-002 protein_coding Homo_sapiens 0 1559
ENST00000414183 EWSR1-021 protein_coding Homo_sapiens 0 1570
ENST00000415761 EWSR1-017 protein_coding Homo_sapiens 0 632
ENST00000436425 EWSR1-012 protein_coding Homo_sapiens 0 593
ENST00000437155 EWSR1-013 protein_coding Homo_sapiens 0 1371
ENST00000444626 EWSR1-016 protein_coding Homo_sapiens 0 409
ENST00000447973 EWSR1-014 protein_coding Homo_sapiens 0 660
ENST00000455726 EWSR1-018 protein_coding Homo_sapiens 0 590
ENST00000469669 EWSR1-009 retained_intron Homo_sapiens 0 1589
ENST00000479135 EWSR1-005 retained_intron Homo_sapiens 0 1589
ENST00000483415 EWSR1-006 retained_intron Homo_sapiens 0 1471
ENST00000483629 EWSR1-010 retained_intron Homo_sapiens 0 750
ENST00000485037 EWSR1-003 retained_intron Homo_sapiens 0 436
ENST00000493426 EWSR1-015 retained_intron Homo_sapiens 0 241
ENST00000550416 RP11-317N8.4-001 processed_pseudogene Homo_sapiens 0 767
ENST00000610553 EWSR1-011 retained_intron Homo_sapiens 0 676

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