C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ewing sarcoma breakpoint region 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079949 Ewsr1-002 ENSMUSG00000009079 10090 - 11:5069689-5099266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverMusclePlacentaTestisENSMUST00000079949
Transcript ID Bladder Brain Kidney Liver Muscle Placenta Testis
ENSMUST00000079949 19.796±1.85 22.625±2.34 10.488±0.19 30.620±8.06 8.587±0.36 16.203±1.64 32.425±8.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VR CIL_0003VR_0002 CGP 11:5069689-5106093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331029 EWSR1-007 protein_coding Homo_sapiens 0 1589
ENST00000332035 EWSR1-008 protein_coding Homo_sapiens 0 2340
ENST00000332050 EWSR1-201 protein_coding Homo_sapiens 0 1718
ENST00000333395 EWSR1-004 protein_coding Homo_sapiens 0 1513
ENST00000360091 EWSR1-019 protein_coding Homo_sapiens 0 771
ENST00000397938 EWSR1-001 protein_coding Homo_sapiens 0 3354
ENST00000400979 RP11-9L18.2-001 processed_pseudogene Homo_sapiens 0 2577
ENST00000406548 EWSR1-002 protein_coding Homo_sapiens 0 3265
ENST00000414183 EWSR1-021 protein_coding Homo_sapiens 0 3131
ENST00000415761 EWSR1-017 protein_coding Homo_sapiens 0 632
ENST00000436425 EWSR1-012 protein_coding Homo_sapiens 0 641
ENST00000437155 EWSR1-013 protein_coding Homo_sapiens 0 1376
ENST00000444626 EWSR1-016 protein_coding Homo_sapiens 0 505
ENST00000447973 EWSR1-014 protein_coding Homo_sapiens 0 706
ENST00000455726 EWSR1-018 protein_coding Homo_sapiens 0 590
ENST00000469669 EWSR1-009 retained_intron Homo_sapiens 0 1653
ENST00000479135 EWSR1-005 retained_intron Homo_sapiens 0 1718
ENST00000483415 EWSR1-006 retained_intron Homo_sapiens 0 1522
ENST00000483629 EWSR1-010 retained_intron Homo_sapiens 0 815
ENST00000485037 EWSR1-003 retained_intron Homo_sapiens 0 459
ENST00000493426 EWSR1-015 retained_intron Homo_sapiens 0 241
ENST00000550416 RP11-317N8.4-001 processed_pseudogene Homo_sapiens 0 767
ENST00000610553 EWSR1-011 retained_intron Homo_sapiens 0 676

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