C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, S
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000013236 Ptprs 10090 - 17:56412431-56476483 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067538 Ptprs-001 56412433-56476483 protein_coding
  ENSMUST00000086828 Ptprs-002 56412431-56462216 protein_coding
  ENSMUST00000143018 Ptprs-003 56422237-56476369 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067538ENSMUST00000086828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067538 33.575±27.64 75.683±26.65 54.246±7.56 106.294±12.06 12.779±5.13 10.239±2.61 7.137±3.83 3.894±1.57 2.407±1.78 21.047±3.16 1.449±0.60 46.228±24.62 2.352±1.48 7.202±3.66
ENSMUST00000086828 15.127±7.70 N/A 12.182±0.38 90.411±39.89 8.762±5.77 7.636±1.50 4.256±2.51 3.744±0.65 1.698±1.30 11.055±1.00 1.355±0.45 21.775±5.11 1.902±0.43 3.145±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ON CIL_0005ON_0002 CGP 17:56326062-56476483
CIL_0005OM CIL_0005OM_0002 CGP 17:56412431-56512483

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0021510 IMP spinal cord development
GO:0021549 IMP cerebellum development
GO:0021766 IMP hippocampus development
GO:0021987 IMP cerebral cortex development
GO:0022038 IMP corpus callosum development
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038590 ptprsb protein tyrosine phosphatase, receptor type, s, b protein_coding Danio_rerio
ENSDARG00000059738 ptprsa protein tyrosine phosphatase, receptor type, s, a protein_coding Danio_rerio
ENSDARG00000073679 CABZ01092973.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000105426 PTPRS protein tyrosine phosphatase, receptor type, S protein_coding Homo_sapiens

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