C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109152 Bcas1-201 ENSMUSG00000013523 10090 - 2:170346991-170427845 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartLiverLungOvaryPlacentaENSMUST00000109152
Transcript ID Adipose Bladder Colon Heart Liver Lung Ovary Placenta
ENSMUST00000109152 0.068±0.02 1.043±0.21 10.775±1.19 0.036±0.00 0.825±0.41 0.148±0.04 0.392±0.19 0.385±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WR CIL_0000WR_0002 CGP 2:170108643-170427845
CIL_0001H3 CIL_0001H3_0002 CGP 2:170346991-170497145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 ISO cytosol
GO:0008150 ND biological_process
GO:0042803 ISO protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371435 BCAS1-003 protein_coding Homo_sapiens 0 337
ENST00000371440 BCAS1-201 protein_coding Homo_sapiens 0 283
ENST00000395961 BCAS1-001 protein_coding Homo_sapiens 0 896

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