C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014445 Pam16-001 ENSMUSG00000014301 10090 - 16:4616464-4624988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000014445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000014445 31.461±0.12 58.317±8.76 39.408±5.65 53.583±27.17 38.941±4.13 30.849±6.94 37.641±9.04 39.441±17.83 47.659±2.45 58.285±13.26 23.967±7.91 124.724±38.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WQ CIL_0000WQ_0002 CGP 16:4544661-4624924
CIL_00009U CIL_00009U_0002 CGP 16:4594713-4624988
CIL_00009Y CIL_00009Y_0002 CGP 16:4616464-4679777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005744 IEA mitochondrial inner membrane presequence translocase complex
GO:0030150 IEA protein import into mitochondrial matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318059 PAM16-001 protein_coding Homo_sapiens 0 514
ENST00000571819 PAM16-008 processed_transcript Homo_sapiens 3e-28 128
ENST00000571941 PAM16-012 protein_coding Homo_sapiens 0 499
ENST00000571986 PAM16-010 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000572467 CORO7-PAM16-001 protein_coding Homo_sapiens 0 501
ENST00000573236 PAM16-016 retained_intron Homo_sapiens 0 501
ENST00000573553 PAM16-015 protein_coding Homo_sapiens 0 499
ENST00000573614 PAM16-013 processed_transcript Homo_sapiens 2e-32 143
ENST00000575334 CORO7-PAM16-002 nonsense_mediated_decay Homo_sapiens 1e-26 126
ENST00000575636 PAM16-006 nonsense_mediated_decay Homo_sapiens 6e-29 132
ENST00000575848 PAM16-014 protein_coding Homo_sapiens 0 505
ENST00000576217 PAM16-002 protein_coding Homo_sapiens 0 514
ENST00000577031 PAM16-005 protein_coding Homo_sapiens 0 392
ENST00000616009 CORO7-PAM16-202 protein_coding Homo_sapiens 0 514
ENST00000617295 CORO7-PAM16-204 protein_coding Homo_sapiens 0 501

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