C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cornichon homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015759 Cnih1 10090 - 14:46775582-46788411 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015903 Cnih1-001 46775582-46788411 protein_coding
  ENSMUST00000146629 Cnih1-002 46775582-46788411 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015903 74.518±11.88 164.757±15.33 35.696±0.95 36.510±2.67 66.214±3.29 48.366±5.58 27.334±3.22 43.205±1.53 41.448±13.70 38.962±2.72 23.717±0.79 61.219±24.38 57.174±20.94 6.217±1.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0002 VISTA 14:46305651-46906520
CIL_00090Z CIL_00090Z_0002 VISTA 14:46310670-46911777
CIL_0000HQ CIL_0000HQ_0002 CGP 14:46760541-46788411
CIL_0000HV CIL_0000HV_0002 CGP 14:46775582-46822242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020311 cnih1 cornichon family AMPA receptor auxiliary protein 1 protein_coding Danio_rerio
ENSG00000100528 CNIH1 cornichon family AMPA receptor auxiliary protein 1 protein_coding Homo_sapiens

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