C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily Q, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140789 Kcnq2-002 ENSMUSG00000016346 10090 - 2:181108444-181135243 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLiverLungOvaryPlacentaENSMUST00000140789
Transcript ID Adipose Bladder Breast Kidney Liver Lung Ovary Placenta
ENSMUST00000140789 0.009±0.00 0.005±0.00 0.011±0.00 0.014±0.00 0.007±0.00 0.016±0.00 0.028±0.02 0.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X3 CIL_0000X3_0002 CGP 2:181018380-181135291
CIL_00045E CIL_00045E_0002 CGP 2:181075579-181157014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342056 KCNQ5-006 protein_coding Homo_sapiens 0.0000000000006 82
ENST00000344425 KCNQ2-006 protein_coding Homo_sapiens 0 647
ENST00000344462 KCNQ2-012 protein_coding Homo_sapiens 0 551
ENST00000355194 KCNQ5-201 protein_coding Homo_sapiens 0.000000000002 81
ENST00000355635 KCNQ5-202 protein_coding Homo_sapiens 0.000000000002 81
ENST00000357249 KCNQ2-001 protein_coding Homo_sapiens 0 647
ENST00000359125 KCNQ2-003 protein_coding Homo_sapiens 0 647
ENST00000360480 KCNQ2-011 protein_coding Homo_sapiens 0 647
ENST00000370221 KCNQ2-009 retained_intron Homo_sapiens 0 647
ENST00000370224 KCNQ2-007 protein_coding Homo_sapiens 0 647
ENST00000370392 KCNQ5-002 protein_coding Homo_sapiens 0.0000000000001 82
ENST00000370398 KCNQ5-001 protein_coding Homo_sapiens 0.0000000000005 82
ENST00000402622 KCNQ5-203 protein_coding Homo_sapiens 0.000000000002 81
ENST00000403813 KCNQ5-204 protein_coding Homo_sapiens 0.000000000002 81
ENST00000414165 KCNQ5-205 protein_coding Homo_sapiens 0.000000000002 81

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