C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytohesin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017132 Cyth1 10090 - 11:118132019-118248592 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017276 Cyth1-001 118164175-118248560 protein_coding
  ENSMUST00000100181 Cyth1-002 118132019-118248502 protein_coding
  ENSMUST00000106302 Cyth1-201 118164166-118212742 protein_coding
  ENSMUST00000106305 Cyth1-202 118164166-118248592 protein_coding
  ENSMUST00000131115 Cyth1-004 118185427-118219025 processed_transcript
  ENSMUST00000141243 Cyth1-005 118184972-118226979 processed_transcript
  ENSMUST00000151165 Cyth1-003 118185446-118212742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017276ENSMUST00000100181ENSMUST00000106302ENSMUST00000106305ENSMUST00000131115ENSMUST00000141243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017276 7.684±2.22 4.257±1.42 3.536±0.43 5.710±2.99 8.534±2.82 10.949±3.75 4.432±1.12 5.243±1.93 2.939±2.02 3.925±0.97 2.177±0.24 2.841±0.82 3.425±1.66 N/A
ENSMUST00000100181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.692±0.00
ENSMUST00000106302 3.033±0.00 N/A 1.504±0.00 N/A 5.104±2.11 2.202±0.00 3.941±0.00 N/A 1.995±0.69 N/A N/A 5.103±1.01 4.105±0.00 N/A
ENSMUST00000106305 4.635±0.32 7.895±2.64 5.295±0.45 5.442±3.31 12.458±6.36 8.779±3.79 7.125±3.11 4.684±2.02 2.517±0.76 10.233±2.16 11.090±1.47 11.932±4.17 7.883±4.30 5.368±1.94
ENSMUST00000131115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.563±0.00 20.118±0.00 89.166±0.00
ENSMUST00000141243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.701±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0002 VISTA 11:117565410-118167678
CIL_00062H CIL_00062H_0002 CGP 11:118021723-118248592
CIL_00062I CIL_00062I_0002 CGP 11:118132019-118290244

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 ISS plasma membrane
GO:0005923 IDA tight junction
GO:0008289 IEA lipid binding
GO:0030155 IBA regulation of cell adhesion
GO:0031234 IDA extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0090162 IMP establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021488 cyth1b cytohesin 1b protein_coding Danio_rerio
ENSG00000108669 CYTH1 cytohesin 1 protein_coding Homo_sapiens

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