C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108669-ENSG00000055483 CGP 9606 17:78674048-78841441
GeneTranscriptPositionBiotype
ENSG00000055483 (USP36)
ubiquitin specific peptidase 36 		ENST00000312010 (USP36-201) 78796883-78840887 protein_coding
ENST00000449938 (USP36-202) 78807255-78836363 protein_coding
ENST00000542802 (USP36-003) 78795653-78840670 protein_coding
ENST00000586066 (USP36-021) 78812860-78828964 protein_coding
ENST00000586531 (USP36-012) 78828946-78840713 protein_coding
ENST00000586896 (USP36-015) 78829004-78838794 protein_coding
ENST00000587010 (USP36-027) 78787381-78798990 nonsense_mediated_decay
ENST00000587379 (USP36-028) 78791863-78798492 nonsense_mediated_decay
ENST00000587783 (USP36-014) 78836164-78840647 protein_coding
ENST00000588086 (USP36-008) 78802461-78840864 non_stop_decay
ENST00000588130 (USP36-029) 78787381-78799722 protein_coding
ENST00000588365 (USP36-011) 78836206-78841225 protein_coding
ENST00000588467 (USP36-024) 78807613-78819097 processed_transcript
ENST00000589225 (USP36-009) 78787467-78840780 nonsense_mediated_decay
ENST00000589254 (USP36-023) 78818667-78821360 retained_intron
ENST00000589424 (USP36-018) 78823122-78840781 protein_coding
ENST00000590312 (USP36-025) 78812972-78818943 retained_intron
ENST00000590546 (USP36-002) 78826473-78840872 protein_coding
ENST00000591052 (USP36-030) 78787466-78798455 nonsense_mediated_decay
ENST00000591942 (USP36-013) 78828992-78840786 nonsense_mediated_decay
ENST00000592231 (USP36-004) 78795653-78798984 protein_coding
ENST00000592275 (USP36-010) 78836124-78841441 protein_coding
ENST00000592326 (USP36-031) 78795652-78797061 processed_transcript
ENST00000592907 (USP36-017) 78836025-78840766 retained_intron
ENSG00000252391 (RNU6-638P)
RNA, U6 small nuclear 638, pseudogene 		ENST00000516582 (RNU6-638P-201) 78696694-78696797 snRNA
ENSG00000279570 (CTD-2357A8.2)
 ENST00000623105 (CTD-2357A8.2-001) 78691266-78691979 TEC
CIL_00062I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017132-ENSMUSG00000033909 CGP 10090 11:118132019-118290244
GeneTranscriptPositionBiotype
ENSMUSG00000017132 (Cyth1)
cytohesin 1 		ENSMUST00000017276 (Cyth1-001) 118164175-118248560 protein_coding
ENSMUST00000100181 (Cyth1-002) 118132019-118248502 protein_coding
ENSMUST00000106302 (Cyth1-201) 118164166-118212742 protein_coding
ENSMUST00000106305 (Cyth1-202) 118164166-118248592 protein_coding
ENSMUST00000131115 (Cyth1-004) 118185427-118219025 processed_transcript
ENSMUST00000141243 (Cyth1-005) 118184972-118226979 processed_transcript
ENSMUST00000151165 (Cyth1-003) 118185446-118212742 protein_coding
ENSMUSG00000033909 (Usp36)
ubiquitin specific peptidase 36 		ENSMUST00000092382 (Usp36-201) 118259653-118290244 protein_coding
ENSMUST00000106296 (Usp36-001) 118259651-118290231 protein_coding
ENSMUST00000141647 (Usp36-004) 118259654-118266048 retained_intron
ENSMUST00000144153 (Usp36-003) 118262388-118290180 protein_coding
ENSMUST00000148998 (Usp36-005) 118260854-118263284 retained_intron
ENSMUST00000151433 (Usp36-002) 118283795-118290072 retained_intron
ENSMUSG00000080810 (Gm11737)
predicted gene 11737 		ENSMUST00000118713 (Gm11737-001) 118204712-118205179 processed_pseudogene
ENSMUSG00000088119 (Gm24060)
predicted gene, 24060 		ENSMUST00000157494 (Gm24060-201) 118180941-118181035 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062I_0001ENSG00000055483ENST00000312010ENST00000449938ENST00000542802ENST00000586066ENST00000586531ENST00000586896ENST00000587010ENST00000587379ENST00000587783ENST00000588086ENST00000588130ENST00000588365ENST00000588467ENST00000589225ENST00000589254ENST00000589424ENST00000590312ENST00000590546ENST00000591052ENST00000591942ENST00000592231ENST00000592275ENST00000592326ENST00000592907ENSG00000252391ENST00000516582ENSG00000279570ENST00000623105CIL_00062I_0002ENSMUSG00000017132ENSMUST00000017276ENSMUST00000100181ENSMUST00000106302ENSMUST00000106305ENSMUST00000131115ENSMUST00000141243ENSMUST00000151165ENSMUSG00000033909ENSMUST00000092382ENSMUST00000106296ENSMUST00000141647ENSMUST00000144153ENSMUST00000148998ENSMUST00000151433ENSMUSG00000080810ENSMUST00000118713ENSMUSG00000088119ENSMUST00000157494
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062I_0001ENSG00000055483ENST00000312010ENST00000449938ENST00000542802ENST00000588086ENST00000588130ENST00000589225ENST00000589424ENST00000590546ENST00000592231ENST00000592907ENSG00000252391ENST00000516582ENSG00000279570ENST00000623105CIL_00062I_0002ENSMUSG00000017132ENSMUST00000017276ENSMUST00000100181ENSMUST00000106302ENSMUST00000106305ENSMUST00000131115ENSMUST00000141243ENSMUSG00000033909ENSMUST00000092382ENSMUST00000106296ENSMUST00000141647ENSMUST00000144153ENSMUST00000148998ENSMUSG00000080810ENSMUST00000118713ENSMUSG00000088119ENSMUST00000157494
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055483 ENST00000312010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.594±0.00 N/A N/A
ENST00000449938 N/A N/A N/A N/A 2.545±0.00 1.433±0.00 0.645±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000542802 4.490±0.00 3.451±0.00 N/A 3.231±0.00 1.936±0.00 N/A 1.528±0.00 N/A N/A N/A N/A 5.751±4.42 3.435±0.00 4.473±1.13
ENST00000586066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588086 N/A N/A 0.712±0.00 0.831±0.00 1.244±0.00 N/A N/A N/A N/A N/A N/A 1.133±0.00 1.540±0.00 N/A
ENST00000588130 N/A N/A N/A N/A N/A 3.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.312±0.00 N/A N/A
ENST00000589254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589424 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.055±0.00 N/A N/A N/A N/A
ENST00000590312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A N/A
ENST00000591052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592231 2.938±0.00 7.625±0.00 1.903±0.00 0.739±0.00 2.146±0.00 1.891±0.00 N/A 5.518±0.00 0.958±0.00 2.594±0.38 2.485±0.00 6.244±2.71 5.178±1.89 4.152±0.00
ENST00000592275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592907 N/A N/A N/A N/A N/A N/A 2.245±0.00 N/A 7.106±0.00 N/A N/A N/A N/A N/A
ENSG00000252391 ENST00000516582 N/A 0.176±0.00 N/A 0.170±0.00 N/A N/A N/A N/A N/A 0.900±0.00 N/A N/A N/A N/A
ENSG00000279570 ENST00000623105 0.094±0.00 0.562±0.00 N/A 0.312±0.00 0.456±0.27 1.037±0.00 0.029±0.00 0.030±0.00 0.595±0.00 1.236±0.92 N/A 0.064±0.02 N/A 0.074±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017132 ENSMUST00000017276 7.684±2.22 4.257±1.42 3.536±0.43 5.710±2.99 8.534±2.82 10.949±3.75 4.432±1.12 5.243±1.93 2.939±2.02 3.925±0.97 2.177±0.24 2.841±0.82 3.425±1.66 N/A
ENSMUST00000100181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.692±0.00
ENSMUST00000106302 3.033±0.00 N/A 1.504±0.00 N/A 5.104±2.11 2.202±0.00 3.941±0.00 N/A 1.995±0.69 N/A N/A 5.103±1.01 4.105±0.00 N/A
ENSMUST00000106305 4.635±0.32 7.895±2.64 5.295±0.45 5.442±3.31 12.458±6.36 8.779±3.79 7.125±3.11 4.684±2.02 2.517±0.76 10.233±2.16 11.090±1.47 11.932±4.17 7.883±4.30 5.368±1.94
ENSMUST00000131115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.563±0.00 20.118±0.00 89.166±0.00
ENSMUST00000141243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.701±0.00
ENSMUST00000151165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033909 ENSMUST00000092382 N/A N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A 1.895±0.00 3.883±0.00 3.655±0.74 N/A
ENSMUST00000106296 5.141±2.75 4.014±1.12 5.328±0.20 4.164±0.93 4.813±0.46 4.769±0.54 3.670±0.50 2.830±0.86 3.058±0.76 6.251±1.79 3.694±0.88 6.563±2.34 3.575±0.72 0.907±0.16
ENSMUST00000141647 N/A 1.901±0.00 1.411±0.00 N/A N/A N/A N/A N/A 0.588±0.10 1.541±0.17 N/A 2.439±0.82 1.640±0.28 0.593±0.00
ENSMUST00000144153 N/A 2.606±0.30 N/A 2.293±0.00 3.219±0.12 2.290±0.50 N/A N/A N/A 2.044±0.00 N/A 3.093±0.29 4.279±1.42 0.828±0.17
ENSMUST00000148998 3.794±0.00 6.647±0.23 N/A N/A N/A 6.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080810 ENSMUST00000118713 0.126±0.00 N/A 0.051±0.00 0.096±0.00 0.350±0.00 0.242±0.00 0.168±0.05 0.158±0.06 0.099±0.08 N/A N/A 0.107±0.00 0.090±0.03 0.173±0.06
ENSMUSG00000088119 ENSMUST00000157494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.616±0.00 N/A

Loading