C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187775-ENSG00000108669 CGP 9606 17:78423697-78782297
GeneTranscriptPositionBiotype
ENSG00000087157 (PGS1)
phosphatidylglycerophosphate synthase 1 		ENST00000262764 (PGS1-001) 78378640-78424554 protein_coding
ENST00000585521 (PGS1-009) 78378697-78419596 processed_transcript
ENST00000586019 (PGS1-010) 78403835-78419862 protein_coding
ENST00000586325 (PGS1-015) 78378649-78396385 processed_transcript
ENST00000586355 (PGS1-011) 78403964-78419927 protein_coding
ENST00000586510 (PGS1-016) 78378649-78398268 nonsense_mediated_decay
ENST00000586880 (PGS1-013) 78420222-78425114 processed_transcript
ENST00000587356 (PGS1-014) 78378678-78400854 protein_coding
ENST00000588169 (PGS1-005) 78378662-78424141 nonsense_mediated_decay
ENST00000588281 (PGS1-007) 78399289-78424557 processed_transcript
ENST00000589425 (PGS1-002) 78378649-78424554 nonsense_mediated_decay
ENST00000589426 (PGS1-004) 78378657-78424554 nonsense_mediated_decay
ENST00000589689 (PGS1-003) 78378651-78403918 protein_coding
ENST00000591996 (PGS1-008) 78400831-78421911 retained_intron
ENST00000592043 (PGS1-006) 78378670-78403679 protein_coding
ENSG00000187775 (DNAH17)
dynein, axonemal, heavy chain 17 		ENST00000389840 (DNAH17-201) 78423697-78577394 protein_coding
ENST00000585328 (DNAH17-001) 78423697-78577394 protein_coding
ENST00000586052 (DNAH17-007) 78423905-78491490 processed_transcript
ENST00000586850 (DNAH17-011) 78426487-78429240 processed_transcript
ENST00000587177 (DNAH17-004) 78502143-78510671 retained_intron
ENST00000589793 (DNAH17-002) 78543755-78571322 retained_intron
ENST00000590227 (DNAH17-006) 78423700-78450298 retained_intron
ENST00000591369 (DNAH17-003) 78423697-78472774 nonsense_mediated_decay
ENST00000591647 (DNAH17-005) 78425524-78426720 retained_intron
ENST00000592152 (DNAH17-009) 78451496-78458888 processed_transcript
ENST00000592192 (DNAH17-012) 78426928-78428551 processed_transcript
ENSG00000243426 (RN7SL454P)
RNA, 7SL, cytoplasmic 454, pseudogene 		ENST00000492744 (RN7SL454P-201) 78532813-78533055 misc_RNA
ENSG00000252391 (RNU6-638P)
RNA, U6 small nuclear 638, pseudogene 		ENST00000516582 (RNU6-638P-201) 78696694-78696797 snRNA
ENSG00000267123 (CTD-2357A8.3)
 ENST00000586185 (CTD-2357A8.3-002) 78618762-78632051 lincRNA
ENST00000590023 (CTD-2357A8.3-003) 78617389-78630170 lincRNA
ENST00000591384 (CTD-2357A8.3-001) 78617469-78632057 lincRNA
ENSG00000279570 (CTD-2357A8.2)
 ENST00000623105 (CTD-2357A8.2-001) 78691266-78691979 TEC
CIL_00062H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033987-ENSMUSG00000017132 CGP 10090 11:118021723-118248592
GeneTranscriptPositionBiotype
ENSMUSG00000017132 (Cyth1)
cytohesin 1 		ENSMUST00000017276 (Cyth1-001) 118164175-118248560 protein_coding
ENSMUST00000100181 (Cyth1-002) 118132019-118248502 protein_coding
ENSMUST00000106302 (Cyth1-201) 118164166-118212742 protein_coding
ENSMUST00000106305 (Cyth1-202) 118164166-118248592 protein_coding
ENSMUST00000131115 (Cyth1-004) 118185427-118219025 processed_transcript
ENSMUST00000141243 (Cyth1-005) 118184972-118226979 processed_transcript
ENSMUST00000151165 (Cyth1-003) 118185446-118212742 protein_coding
ENSMUSG00000017715 (Pgs1)
phosphatidylglycerophosphate synthase 1 		ENSMUST00000017859 (Pgs1-004) 117986885-118024011 nonsense_mediated_decay
ENSMUST00000100185 (Pgs1-003) 118000795-118023925 nonsense_mediated_decay
ENSMUST00000132676 (Pgs1-001) 117986292-118024011 protein_coding
ENSMUST00000155507 (Pgs1-002) 118012343-118024011 retained_intron
ENSMUSG00000080810 (Gm11737)
predicted gene 11737 		ENSMUST00000118713 (Gm11737-001) 118204712-118205179 processed_pseudogene
ENSMUSG00000088119 (Gm24060)
predicted gene, 24060 		ENSMUST00000157494 (Gm24060-201) 118180941-118181035 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062H_0001ENSG00000087157ENST00000262764ENST00000585521ENST00000586019ENST00000586325ENST00000586355ENST00000586510ENST00000586880ENST00000587356ENST00000588169ENST00000588281ENST00000589425ENST00000589426ENST00000589689ENST00000591996ENST00000592043ENSG00000187775ENST00000389840ENST00000585328ENST00000586052ENST00000586850ENST00000587177ENST00000589793ENST00000590227ENST00000591369ENST00000591647ENST00000592152ENST00000592192ENSG00000243426ENST00000492744ENSG00000252391ENST00000516582ENSG00000267123ENST00000586185ENST00000590023ENST00000591384ENSG00000279570ENST00000623105CIL_00062H_0002ENSMUSG00000017132ENSMUST00000017276ENSMUST00000100181ENSMUST00000106302ENSMUST00000106305ENSMUST00000131115ENSMUST00000141243ENSMUST00000151165ENSMUSG00000017715ENSMUST00000017859ENSMUST00000100185ENSMUST00000132676ENSMUST00000155507ENSMUSG00000080810ENSMUST00000118713ENSMUSG00000088119ENSMUST00000157494
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062H_0001ENSG00000087157ENST00000262764ENST00000585521ENST00000587356ENST00000588169ENST00000588281ENST00000589425ENST00000589426ENST00000591996ENST00000592043ENSG00000187775ENST00000389840ENST00000585328ENST00000586052ENST00000590227ENST00000591369ENSG00000243426ENST00000492744ENSG00000252391ENST00000516582ENSG00000267123ENST00000586185ENST00000590023ENST00000591384ENSG00000279570ENST00000623105CIL_00062H_0002ENSMUSG00000017132ENSMUST00000017276ENSMUST00000100181ENSMUST00000106302ENSMUST00000106305ENSMUST00000131115ENSMUST00000141243ENSMUSG00000017715ENSMUST00000017859ENSMUST00000132676ENSMUST00000155507ENSMUSG00000080810ENSMUST00000118713ENSMUSG00000088119ENSMUST00000157494
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087157 ENST00000262764 N/A N/A N/A N/A N/A N/A 2.237±0.00 N/A 1.295±0.00 N/A N/A 5.399±2.01 6.602±0.60 N/A
ENST00000585521 N/A N/A N/A N/A N/A N/A N/A 1.116±0.00 N/A N/A 1.728±0.00 N/A 5.101±0.00 N/A
ENST00000586019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587356 N/A N/A N/A N/A 4.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.171±0.00 N/A
ENST00000588281 3.178±0.00 N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 11.991±0.00 N/A 3.369±0.27 3.757±0.00 N/A
ENST00000589425 N/A 3.785±0.00 N/A N/A 2.692±0.00 N/A N/A 5.504±0.00 0.570±0.00 N/A N/A N/A N/A N/A
ENST00000589426 N/A 4.250±0.00 N/A N/A N/A N/A 0.982±0.00 3.813±0.00 N/A N/A 2.010±0.00 3.984±0.00 2.275±0.00 N/A
ENST00000589689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591996 N/A 3.554±0.00 N/A 1.042±0.00 0.986±0.33 N/A 0.238±0.00 N/A 0.616±0.29 3.549±0.00 0.659±0.00 2.267±0.51 1.529±0.46 N/A
ENST00000592043 N/A N/A N/A 3.525±0.00 N/A 3.172±0.64 0.735±0.00 N/A 1.682±0.00 N/A 1.908±0.00 N/A N/A N/A
ENSG00000187775 ENST00000389840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.504±4.61
ENST00000585328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.845±0.00
ENST00000586052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A
ENST00000586850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590227 N/A N/A N/A 8.390±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591369 N/A N/A N/A 4.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.931±5.20
ENST00000591647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243426 ENST00000492744 0.348±0.00 1.763±0.00 N/A 1.296±0.00 0.902±0.00 0.706±0.00 1.004±0.00 1.075±0.00 0.087±0.00 1.467±0.00 N/A 5.212±0.00 N/A 1.308±0.00
ENSG00000252391 ENST00000516582 N/A 0.176±0.00 N/A 0.170±0.00 N/A N/A N/A N/A N/A 0.900±0.00 N/A N/A N/A N/A
ENSG00000267123 ENST00000586185 0.021±0.00 0.046±0.00 N/A N/A 0.025±0.00 N/A N/A 0.024±0.00 0.021±0.00 N/A N/A 0.094±0.04 N/A 0.085±0.00
ENST00000590023 N/A 0.150±0.00 N/A N/A 0.359±0.00 N/A N/A N/A N/A N/A N/A 0.522±0.00 0.130±0.00 0.338±0.00
ENST00000591384 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A 0.144±0.00 N/A 0.112±0.00
ENSG00000279570 ENST00000623105 0.094±0.00 0.562±0.00 N/A 0.312±0.00 0.456±0.27 1.037±0.00 0.029±0.00 0.030±0.00 0.595±0.00 1.236±0.92 N/A 0.064±0.02 N/A 0.074±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017132 ENSMUST00000017276 7.684±2.22 4.257±1.42 3.536±0.43 5.710±2.99 8.534±2.82 10.949±3.75 4.432±1.12 5.243±1.93 2.939±2.02 3.925±0.97 2.177±0.24 2.841±0.82 3.425±1.66 N/A
ENSMUST00000100181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.692±0.00
ENSMUST00000106302 3.033±0.00 N/A 1.504±0.00 N/A 5.104±2.11 2.202±0.00 3.941±0.00 N/A 1.995±0.69 N/A N/A 5.103±1.01 4.105±0.00 N/A
ENSMUST00000106305 4.635±0.32 7.895±2.64 5.295±0.45 5.442±3.31 12.458±6.36 8.779±3.79 7.125±3.11 4.684±2.02 2.517±0.76 10.233±2.16 11.090±1.47 11.932±4.17 7.883±4.30 5.368±1.94
ENSMUST00000131115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.563±0.00 20.118±0.00 89.166±0.00
ENSMUST00000141243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.701±0.00
ENSMUST00000151165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017715 ENSMUST00000017859 11.612±2.75 87.003±41.91 7.893±1.89 15.331±2.96 11.021±1.89 5.451±0.00 5.343±0.30 7.468±0.71 5.386±1.91 16.378±2.60 8.407±0.57 10.085±2.96 14.900±5.46 N/A
ENSMUST00000100185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132676 9.832±2.89 28.708±21.35 N/A 11.106±2.53 13.324±6.19 24.439±3.60 4.208±0.14 8.434±2.39 4.278±1.24 36.692±14.02 2.352±0.47 29.984±10.36 2.253±0.01 18.434±1.01
ENSMUST00000155507 3.196±0.14 N/A 1.854±0.09 3.089±0.00 3.572±0.44 N/A 1.164±0.07 N/A 1.840±0.20 6.687±0.00 0.953±0.10 3.773±0.76 2.656±0.64 N/A
ENSMUSG00000080810 ENSMUST00000118713 0.126±0.00 N/A 0.051±0.00 0.096±0.00 0.350±0.00 0.242±0.00 0.168±0.05 0.158±0.06 0.099±0.08 N/A N/A 0.107±0.00 0.090±0.03 0.173±0.06
ENSMUSG00000088119 ENSMUST00000157494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.616±0.00 N/A

Loading