C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytohesin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108669 CYTH1 9606 - 17:78674048-78782297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361101 CYTH1-201 78674048-78782294 protein_coding
  ENST00000446868 CYTH1-001 78674048-78782294 protein_coding
  ENST00000585509 CYTH1-016 78674048-78717025 protein_coding
  ENST00000586043 CYTH1-005 78700331-78727965 protein_coding
  ENST00000586175 CYTH1-011 78675656-78692493 processed_transcript
  ENST00000586299 CYTH1-017 78674049-78678471 retained_intron
  ENST00000586430 CYTH1-010 78675848-78681066 retained_intron
  ENST00000587308 CYTH1-020 78700392-78723564 protein_coding
  ENST00000589296 CYTH1-012 78674048-78782297 protein_coding
  ENST00000589297 CYTH1-015 78674048-78723750 protein_coding
  ENST00000589768 CYTH1-018 78698269-78736890 protein_coding
  ENST00000590300 CYTH1-006 78701672-78724046 protein_coding
  ENST00000590775 CYTH1-019 78676119-78723566 processed_transcript
  ENST00000591095 CYTH1-014 78708912-78736967 retained_intron
  ENST00000591455 CYTH1-002 78674048-78782272 protein_coding
  ENST00000591574 CYTH1-009 78675820-78782289 nonsense_mediated_decay
  ENST00000592497 CYTH1-013 78709351-78782273 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000446868ENST00000585509ENST00000586299ENST00000589296ENST00000589297ENST00000589768ENST00000591455
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000446868 8.327±0.00 23.817±0.00 7.543±6.28 2.466±0.45 3.296±1.90 3.090±2.38 1.204±0.00 1.544±0.13 8.093±3.39 5.922±0.00 3.336±1.45 5.945±0.68 1.902±0.00
ENST00000585509 N/A N/A 2.233±0.00 N/A 1.548±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586299 N/A 8.142±0.00 5.110±0.00 1.770±0.50 0.938±0.06 0.743±0.00 1.687±0.00 0.779±0.00 5.022±0.00 0.629±0.00 2.510±1.46 1.555±0.17 1.213±0.00
ENST00000589296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.013±0.00 5.053±0.00 N/A
ENST00000589297 N/A N/A 3.449±0.00 N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000589768 N/A N/A 17.486±0.00 2.218±0.00 3.279±0.00 N/A N/A N/A 4.504±0.00 N/A 2.135±0.00 N/A N/A
ENST00000591455 8.586±0.00 N/A N/A 3.391±2.07 1.243±0.00 0.989±0.00 2.644±0.00 1.637±0.61 4.258±2.19 4.317±0.00 1.958±0.59 4.178±0.41 6.444±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062H CIL_00062H_0001 CGP 17:78423697-78782297
CIL_00062I CIL_00062I_0001 CGP 17:78674048-78841441

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IEA:IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0005886 IDA plasma membrane
GO:0005923 IEA tight junction
GO:0008289 IEA lipid binding
GO:0030155 IDA regulation of cell adhesion
GO:0031234 ISS extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0090162 IEA establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021488 cyth1b cytohesin 1b protein_coding Danio_rerio
ENSMUSG00000017132 Cyth1 cytohesin 1 protein_coding Mus_musculus

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