C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GH3 domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017747 Ghdc 10090 - 11:100766032-100770957 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017891 Ghdc-001 100766032-100770957 protein_coding
  ENSMUST00000139341 Ghdc-002 100769692-100770942 protein_coding
  ENSMUST00000147682 Ghdc-003 100766811-100768713 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017891ENSMUST00000147682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017891 8.683±3.07 14.683±1.11 7.221±1.56 1.943±0.31 5.690±2.17 8.812±0.79 3.766±0.95 14.081±0.59 5.241±3.14 6.839±0.66 2.195±0.38 6.255±1.38 6.504±2.76 0.547±0.23
ENSMUST00000147682 N/A N/A N/A 1.939±0.00 N/A N/A N/A N/A N/A N/A 1.161±0.00 4.069±0.00 6.980±1.50 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DQ CIL_0006DQ_0002 CGP 11:100761069-100770957
CIL_0000KW CIL_0000KW_0003 CGP 11:100766032-100850724

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055569 ghdc GH3 domain containing protein_coding Danio_rerio
ENSG00000167925 GHDC GH3 domain containing protein_coding Homo_sapiens

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