C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GH3 domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017891 Ghdc-001 ENSMUSG00000017747 10090 - 11:100766032-100770957 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017891 8.683±3.07 14.683±1.11 7.221±1.56 1.943±0.31 5.690±2.17 8.812±0.79 3.766±0.95 14.081±0.59 5.241±3.14 6.839±0.66 2.195±0.38 6.255±1.38 6.504±2.76 0.547±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DQ CIL_0006DQ_0002 CGP 11:100761069-100770957
CIL_0000KW CIL_0000KW_0003 CGP 11:100766032-100850724

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301671 GHDC-006 protein_coding Homo_sapiens 0 1245
ENST00000414034 GHDC-002 protein_coding Homo_sapiens 0 1000
ENST00000428494 GHDC-201 protein_coding Homo_sapiens 0 1000
ENST00000587427 GHDC-001 protein_coding Homo_sapiens 0 1245
ENST00000593209 GHDC-005 protein_coding Homo_sapiens 0 1096

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