C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161610-ENSG00000167925 CGP 9606 17:42184060-42194532
GeneTranscriptPositionBiotype
ENSG00000161610 (HCRT)
hypocretin (orexin) neuropeptide precursor 		ENST00000293330 (HCRT-001) 42184060-42185452 protein_coding
ENSG00000167925 (GHDC)
GH3 domain containing 		ENST00000301671 (GHDC-006) 42189088-42194195 protein_coding
ENST00000414034 (GHDC-002) 42189088-42194494 protein_coding
ENST00000428494 (GHDC-201) 42189090-42194532 protein_coding
ENST00000585375 (GHDC-010) 42193189-42194494 retained_intron
ENST00000585735 (GHDC-012) 42189943-42191070 retained_intron
ENST00000586692 (GHDC-011) 42192931-42194513 processed_transcript
ENST00000587427 (GHDC-001) 42189089-42194484 protein_coding
ENST00000588352 (GHDC-008) 42192739-42194487 protein_coding
ENST00000588762 (GHDC-003) 42192545-42194478 nonsense_mediated_decay
ENST00000590249 (GHDC-007) 42192692-42194502 protein_coding
ENST00000590520 (GHDC-009) 42192952-42194308 processed_transcript
ENST00000593209 (GHDC-005) 42188799-42194459 protein_coding
CIL_0006DQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045471-ENSMUSG00000017747 CGP 10090 11:100761069-100770957
GeneTranscriptPositionBiotype
ENSMUSG00000017747 (Ghdc)
GH3 domain containing 		ENSMUST00000017891 (Ghdc-001) 100766032-100770957 protein_coding
ENSMUST00000139341 (Ghdc-002) 100769692-100770942 protein_coding
ENSMUST00000147682 (Ghdc-003) 100766811-100768713 processed_transcript
ENSMUSG00000045471 (Hcrt)
hypocretin 		ENSMUST00000055083 (Hcrt-001) 100761691-100762931 protein_coding
ENSMUST00000107360 (Hcrt-002) 100761069-100762928 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DQ_0001ENSG00000161610ENST00000293330ENSG00000167925ENST00000301671ENST00000414034ENST00000428494ENST00000585375ENST00000585735ENST00000586692ENST00000587427ENST00000588352ENST00000588762ENST00000590249ENST00000590520ENST00000593209CIL_0006DQ_0002ENSMUSG00000017747ENSMUST00000017891ENSMUST00000139341ENSMUST00000147682ENSMUSG00000045471ENSMUST00000055083ENSMUST00000107360
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DQ_0001ENSG00000161610ENST00000293330ENSG00000167925ENST00000301671ENST00000414034ENST00000585735ENST00000586692ENST00000587427ENST00000588352ENST00000590520ENST00000593209CIL_0006DQ_0002ENSMUSG00000017747ENSMUST00000017891ENSMUST00000147682ENSMUSG00000045471ENSMUST00000055083ENSMUST00000107360
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161610 ENST00000293330 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.468±0.00 N/A N/A N/A 0.387±0.00
ENSG00000167925 ENST00000301671 N/A 2.685±0.00 N/A 0.857±0.61 N/A N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A 1.007±0.00
ENST00000414034 N/A N/A N/A 1.209±0.00 0.828±0.00 N/A 0.686±0.00 N/A N/A 4.207±0.00 0.740±0.00 2.270±1.89 N/A 1.136±0.00
ENST00000428494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585735 N/A N/A N/A N/A N/A N/A 0.395±0.00 N/A N/A N/A N/A N/A N/A 1.290±0.00
ENST00000586692 N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A 1.308±0.00 N/A N/A N/A N/A
ENST00000587427 7.015±0.00 18.849±0.00 0.626±0.00 1.794±0.55 6.062±5.92 1.522±0.95 1.185±1.11 4.070±0.00 3.785±3.33 6.172±0.00 2.801±2.58 12.127±7.12 18.982±2.13 6.038±4.29
ENST00000588352 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.829±0.00 N/A 1.877±0.00 N/A N/A
ENST00000588762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590520 N/A N/A N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A N/A
ENST00000593209 N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A N/A 1.673±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017747 ENSMUST00000017891 8.683±3.07 14.683±1.11 7.221±1.56 1.943±0.31 5.690±2.17 8.812±0.79 3.766±0.95 14.081±0.59 5.241±3.14 6.839±0.66 2.195±0.38 6.255±1.38 6.504±2.76 0.547±0.23
ENSMUST00000139341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147682 N/A N/A N/A 1.939±0.00 N/A N/A N/A N/A N/A N/A 1.161±0.00 4.069±0.00 6.980±1.50 N/A
ENSMUSG00000045471 ENSMUST00000055083 0.110±0.00 N/A 0.072±0.00 3.930±5.12 N/A 0.172±0.10 N/A 0.201±0.02 0.043±0.02 N/A N/A 0.253±0.07 0.196±0.00 0.996±0.34
ENSMUST00000107360 N/A 0.224±0.14 N/A N/A 0.154±0.01 N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 1.057±0.42

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