C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055569-ENSDARG00000055588 CGP 7955 12:14633466-14756388
GeneTranscriptPositionBiotype
ENSDARG00000055569 (ghdc)
GH3 domain containing 		ENSDART00000133895 (ghdc-001) 14633466-14655582 protein_coding
CIL_0000KW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167925-ENSG00000173757 CGP 9606 17:42188799-42276707
GeneTranscriptPositionBiotype
ENSG00000167925 (GHDC)
GH3 domain containing 		ENST00000301671 (GHDC-006) 42189088-42194195 protein_coding
ENST00000414034 (GHDC-002) 42189088-42194494 protein_coding
ENST00000428494 (GHDC-201) 42189090-42194532 protein_coding
ENST00000585375 (GHDC-010) 42193189-42194494 retained_intron
ENST00000585735 (GHDC-012) 42189943-42191070 retained_intron
ENST00000586692 (GHDC-011) 42192931-42194513 processed_transcript
ENST00000587427 (GHDC-001) 42189089-42194484 protein_coding
ENST00000588352 (GHDC-008) 42192739-42194487 protein_coding
ENST00000588762 (GHDC-003) 42192545-42194478 nonsense_mediated_decay
ENST00000590249 (GHDC-007) 42192692-42194502 protein_coding
ENST00000590520 (GHDC-009) 42192952-42194308 processed_transcript
ENST00000593209 (GHDC-005) 42188799-42194459 protein_coding
ENSG00000173757 (STAT5B)
signal transducer and activator of transcription 5B 		ENST00000293328 (STAT5B-001) 42199168-42276406 protein_coding
ENST00000415845 (STAT5B-003) 42223463-42276707 protein_coding
ENST00000468312 (STAT5B-002) 42217690-42276406 retained_intron
ENST00000468496 (STAT5B-006) 42207582-42217282 retained_intron
ENST00000481253 (STAT5B-005) 42207559-42210592 retained_intron
ENST00000481517 (STAT5B-004) 42210417-42217871 retained_intron
ENST00000498674 (STAT5B-007) 42202103-42202953 retained_intron
ENSG00000236194 (AC003104.1)
 ENST00000597755 (AC003104.1-001) 42270517-42272683 sense_intronic
ENSG00000267758 (RP11-358B23.5)
 ENST00000592536 (RP11-358B23.5-001) 42268587-42269807 antisense
ENSG00000278829 (RP11-358B23.7)
 ENST00000617211 (RP11-358B23.7-001) 42272069-42275571 sense_intronic
ENSG00000280295 (RP11-358B23.6)
 ENST00000624554 (RP11-358B23.6-001) 42233832-42235469 TEC
CIL_0000KW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017747-ENSMUSG00000020919 CGP 10090 11:100766032-100850724
GeneTranscriptPositionBiotype
ENSMUSG00000017747 (Ghdc)
GH3 domain containing 		ENSMUST00000017891 (Ghdc-001) 100766032-100770957 protein_coding
ENSMUST00000139341 (Ghdc-002) 100769692-100770942 protein_coding
ENSMUST00000147682 (Ghdc-003) 100766811-100768713 processed_transcript
ENSMUSG00000020919 (Stat5b)
signal transducer and activator of transcription 5B 		ENSMUST00000004143 (Stat5b-001) 100780731-100850724 protein_coding
ENSMUST00000107358 (Stat5b-002) 100780731-100822528 protein_coding
ENSMUST00000126266 (Stat5b-003) 100798667-100850538 processed_transcript
ENSMUSG00000089049 (Gm24358)
predicted gene, 24358 		ENSMUST00000158424 (Gm24358-201) 100774513-100774800 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KW_0001ENSDARG00000055569ENSDART00000133895CIL_0000KW_0002ENSG00000167925ENST00000301671ENST00000414034ENST00000428494ENST00000585375ENST00000585735ENST00000586692ENST00000587427ENST00000588352ENST00000588762ENST00000590249ENST00000590520ENST00000593209ENSG00000173757ENST00000293328ENST00000415845ENST00000468312ENST00000468496ENST00000481253ENST00000481517ENST00000498674ENSG00000236194ENST00000597755ENSG00000267758ENST00000592536ENSG00000278829ENST00000617211ENSG00000280295ENST00000624554CIL_0000KW_0003ENSMUSG00000017747ENSMUST00000017891ENSMUST00000139341ENSMUST00000147682ENSMUSG00000020919ENSMUST00000004143ENSMUST00000107358ENSMUST00000126266ENSMUSG00000089049ENSMUST00000158424
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KW_0001ENSDARG00000055569ENSDART00000133895CIL_0000KW_0002ENSG00000167925ENST00000301671ENST00000414034ENST00000585735ENST00000586692ENST00000587427ENST00000588352ENST00000590520ENST00000593209ENSG00000173757ENST00000293328ENST00000468312ENSG00000236194ENST00000597755ENSG00000267758ENST00000592536ENSG00000278829ENST00000617211ENSG00000280295ENST00000624554CIL_0000KW_0003ENSMUSG00000017747ENSMUST00000017891ENSMUST00000147682ENSMUSG00000020919ENSMUST00000004143ENSMUST00000107358ENSMUSG00000089049ENSMUST00000158424
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055569 ENSDART00000133895 N/A N/A N/A 2.497±0.49 N/A N/A 3.298±1.31 2.913±0.79 0.206±0.00 N/A 0.934±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167925 ENST00000301671 N/A 2.685±0.00 N/A 0.857±0.61 N/A N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A 1.007±0.00
ENST00000414034 N/A N/A N/A 1.209±0.00 0.828±0.00 N/A 0.686±0.00 N/A N/A 4.207±0.00 0.740±0.00 2.270±1.89 N/A 1.136±0.00
ENST00000428494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585735 N/A N/A N/A N/A N/A N/A 0.395±0.00 N/A N/A N/A N/A N/A N/A 1.290±0.00
ENST00000586692 N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A 1.308±0.00 N/A N/A N/A N/A
ENST00000587427 7.015±0.00 18.849±0.00 0.626±0.00 1.794±0.55 6.062±5.92 1.522±0.95 1.185±1.11 4.070±0.00 3.785±3.33 6.172±0.00 2.801±2.58 12.127±7.12 18.982±2.13 6.038±4.29
ENST00000588352 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.829±0.00 N/A 1.877±0.00 N/A N/A
ENST00000588762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590520 N/A N/A N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A N/A
ENST00000593209 N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A N/A 1.673±0.00 N/A
ENSG00000173757 ENST00000293328 17.059±0.00 10.620±0.00 2.552±0.00 4.278±3.03 21.469±0.00 13.485±0.00 3.960±2.49 4.716±2.45 4.556±1.27 13.174±10.00 16.804±14.95 8.818±8.01 11.393±2.56 10.570±8.16
ENST00000415845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468312 N/A N/A N/A N/A N/A 1.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236194 ENST00000597755 0.007±0.00 0.224±0.00 0.302±0.00 0.066±0.05 0.269±0.13 0.471±0.00 0.006±0.00 0.283±0.24 N/A 0.043±0.00 0.147±0.00 0.169±0.13 0.022±0.00 0.090±0.03
ENSG00000267758 ENST00000592536 0.156±0.00 0.201±0.00 N/A 0.217±0.19 0.127±0.00 N/A 0.020±0.00 N/A N/A 0.037±0.00 N/A 0.860±0.68 0.191±0.00 0.105±0.03
ENSG00000278829 ENST00000617211 0.343±0.00 0.679±0.00 1.210±0.00 0.262±0.18 0.131±0.07 0.325±0.28 0.132±0.00 0.345±0.00 0.289±0.28 0.582±0.43 N/A 0.270±0.14 2.156±0.00 0.152±0.07
ENSG00000280295 ENST00000624554 0.087±0.00 0.260±0.00 0.119±0.00 0.060±0.00 0.386±0.22 0.150±0.14 0.035±0.01 0.229±0.15 0.250±0.24 0.052±0.00 0.092±0.00 0.052±0.03 0.015±0.00 0.114±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017747 ENSMUST00000017891 8.683±3.07 14.683±1.11 7.221±1.56 1.943±0.31 5.690±2.17 8.812±0.79 3.766±0.95 14.081±0.59 5.241±3.14 6.839±0.66 2.195±0.38 6.255±1.38 6.504±2.76 0.547±0.23
ENSMUST00000139341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147682 N/A N/A N/A 1.939±0.00 N/A N/A N/A N/A N/A N/A 1.161±0.00 4.069±0.00 6.980±1.50 N/A
ENSMUSG00000020919 ENSMUST00000004143 13.828±3.31 18.110±5.88 6.721±0.04 4.955±1.24 19.353±6.82 7.489±1.98 11.821±3.73 7.563±3.02 10.480±1.65 19.132±1.57 11.856±5.66 23.767±5.17 4.466±3.48 0.975±0.25
ENSMUST00000107358 N/A 10.292±4.39 N/A N/A 4.711±0.81 1.676±0.00 2.461±0.38 N/A 5.569±0.67 N/A 27.042±8.03 N/A N/A N/A
ENSMUST00000126266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089049 ENSMUST00000158424 N/A N/A N/A 0.073±0.00 0.977±0.59 N/A N/A N/A 0.172±0.11 N/A N/A N/A 0.043±0.00 0.289±0.00

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